BLASTX nr result

ID: Cnidium21_contig00018184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018184
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280261.2| PREDICTED: uncharacterized protein LOC100262...   172   1e-55
emb|CAN78123.1| hypothetical protein VITISV_041548 [Vitis vinifera]   172   7e-54
ref|XP_002509462.1| conserved hypothetical protein [Ricinus comm...   152   2e-45
gb|AAF98427.1|AC021044_6 Unknown protein [Arabidopsis thaliana]       146   2e-41
ref|XP_002893517.1| VQ motif-containing protein [Arabidopsis lyr...   146   2e-41

>ref|XP_002280261.2| PREDICTED: uncharacterized protein LOC100262292 [Vitis vinifera]
          Length = 308

 Score =  172 bits (435), Expect(2) = 1e-55
 Identities = 95/140 (67%), Positives = 104/140 (74%), Gaps = 8/140 (5%)
 Frame = -1

Query: 606 DPVRNLIPPIKSVTKKDKASKLYERRNSLKNFKISPLVPGGFENYSG-SPRTPEVLSPSM 430
           DP R  IPPIK+  KK    KLYERRNSLKN K+SPL+PG  +N SG SPR PE+LSPSM
Sbjct: 164 DP-RTHIPPIKTGAKKQPGFKLYERRNSLKNLKLSPLIPGFVQNNSGFSPRKPEILSPSM 222

Query: 429 LKFPGLILSPVTPLILDPFNRYVNNNVS-------NIDMEAENKAIAHKGFYLHPSPTTT 271
           L FP L+LSPVTPLI DPFNR   N+ S       N+D EAE KAIA KGF+LHPSP TT
Sbjct: 223 LDFPALVLSPVTPLIPDPFNRSPMNSCSSSASANANLDSEAEEKAIAEKGFFLHPSPATT 282

Query: 270 PRGGSEPRLLPLFPVTSPRV 211
           PR  SEPRLL LFPVTSPRV
Sbjct: 283 PR-DSEPRLLSLFPVTSPRV 301



 Score = 71.6 bits (174), Expect(2) = 1e-55
 Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 8/66 (12%)
 Frame = -2

Query: 866 SQFDPSMENSPKLQENQNPSLIPSPNSHGSNISGSTNSGHS--------TPVTRSDPNNP 711
           +Q DPS ENSPK  E QNPSLIPSPNSH +N S S++S  +         P+TRS+ +NP
Sbjct: 68  NQTDPSTENSPKPLEGQNPSLIPSPNSHSTNSSSSSSSNSNGLHHPPTPKPITRSE-SNP 126

Query: 710 YPTTFV 693
           YPTTFV
Sbjct: 127 YPTTFV 132


>emb|CAN78123.1| hypothetical protein VITISV_041548 [Vitis vinifera]
          Length = 235

 Score =  172 bits (435), Expect(2) = 7e-54
 Identities = 95/140 (67%), Positives = 104/140 (74%), Gaps = 8/140 (5%)
 Frame = -1

Query: 606 DPVRNLIPPIKSVTKKDKASKLYERRNSLKNFKISPLVPGGFENYSG-SPRTPEVLSPSM 430
           DP R  IPPIK+  KK    KLYERRNSLKN K+SPL+PG  +N SG SPR PE+LSPSM
Sbjct: 91  DP-RTHIPPIKTGAKKQPGFKLYERRNSLKNLKLSPLIPGFVQNNSGFSPRKPEILSPSM 149

Query: 429 LKFPGLILSPVTPLILDPFNRYVNNNVS-------NIDMEAENKAIAHKGFYLHPSPTTT 271
           L FP L+LSPVTPLI DPFNR   N+ S       N+D EAE KAIA KGF+LHPSP TT
Sbjct: 150 LDFPALVLSPVTPLIPDPFNRSPMNSCSSSASANANLDSEAEEKAIAEKGFFLHPSPATT 209

Query: 270 PRGGSEPRLLPLFPVTSPRV 211
           PR  SEPRLL LFPVTSPRV
Sbjct: 210 PR-DSEPRLLSLFPVTSPRV 228



 Score = 65.9 bits (159), Expect(2) = 7e-54
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 8/60 (13%)
 Frame = -2

Query: 848 MENSPKLQENQNPSLIPSPNSHGSNISGSTNSGHS--------TPVTRSDPNNPYPTTFV 693
           MENSPK  E QNPSLIPSPNSH +N S S++S  +         P+TRS+ +NPYPTTFV
Sbjct: 1   MENSPKPLEGQNPSLIPSPNSHSTNSSSSSSSNSNGLHHPPTPKPITRSE-SNPYPTTFV 59


>ref|XP_002509462.1| conserved hypothetical protein [Ricinus communis]
           gi|223549361|gb|EEF50849.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 266

 Score =  152 bits (383), Expect(2) = 2e-45
 Identities = 87/150 (58%), Positives = 100/150 (66%), Gaps = 24/150 (16%)
 Frame = -1

Query: 588 IPPIKSVTKKDKAS---KLYERRNSLKNFKISPLVPGGFENYSG-SPRTPEVLSPSMLKF 421
           IPPIK++ KK++ S   KLYERRNSLKN KI+PL P    N  G SPR PE+LSPS+L F
Sbjct: 109 IPPIKTIPKKNQTSSGFKLYERRNSLKNLKINPLNPIFAPNNPGFSPRKPEILSPSILDF 168

Query: 420 PGLILSPVTPLILDPFNR--------------YVNNNVSN------IDMEAENKAIAHKG 301
           P L+LSPVTPLI DPF+R                NNN SN      +D +AE KAI  KG
Sbjct: 169 PALVLSPVTPLIPDPFDRSGAVNYTTNCYNSPMSNNNKSNPNNGNLLDTDAEEKAIKEKG 228

Query: 300 FYLHPSPTTTPRGGSEPRLLPLFPVTSPRV 211
           F+LHPSP +TPR    PRLLPLFPVTSPRV
Sbjct: 229 FFLHPSPASTPREAEPPRLLPLFPVTSPRV 258



 Score = 57.8 bits (138), Expect(2) = 2e-45
 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 21/73 (28%)
 Frame = -2

Query: 848 MENSPKLQENQNP-----SLIPSPNSHGSNISGSTNSGHST----------------PVT 732
           ME SPK Q+NQNP     SL+PSPNSH S  + S+NS  +T                P+T
Sbjct: 1   METSPKHQDNQNPHTQTQSLLPSPNSHSS--TSSSNSSTTTNNALHHCNQPPLPSPKPIT 58

Query: 731 RSDPNNPYPTTFV 693
           RS+  NPYPTTFV
Sbjct: 59  RSEITNPYPTTFV 71


>gb|AAF98427.1|AC021044_6 Unknown protein [Arabidopsis thaliana]
          Length = 259

 Score =  146 bits (369), Expect(2) = 2e-41
 Identities = 82/141 (58%), Positives = 99/141 (70%), Gaps = 7/141 (4%)
 Frame = -1

Query: 612 RPDPVRNLIPPIKSVTKKDKAS------KLYERRNSLKNFKISPLVPG-GFENYSGSPRT 454
           R  P    IPPIK+V  K ++S      +LYERRNS+KN KI+PL P     N + SPR 
Sbjct: 111 RSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRK 170

Query: 453 PEVLSPSMLKFPGLILSPVTPLILDPFNRYVNNNVSNIDMEAENKAIAHKGFYLHPSPTT 274
           PE+LSPS+L FP L+LSPVTPLI DPF+R  ++N S  ++ AE KA+  +GFYLHPSP T
Sbjct: 171 PEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPAT 230

Query: 273 TPRGGSEPRLLPLFPVTSPRV 211
           TP    EPRLLPLFPVTSPRV
Sbjct: 231 TPM-DPEPRLLPLFPVTSPRV 250



 Score = 49.3 bits (116), Expect(2) = 2e-41
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
 Frame = -2

Query: 851 SMENSPKLQENQNPSLIPSPNSHGSN------ISGSTNSGHSTPV----TRSDPNNPYPT 702
           +MENSP+ +E  N  LIPSP  H SN       S  +N   +TP     TRS+  NPYPT
Sbjct: 12  TMENSPRYREATN--LIPSPRCHNSNNSCGMSSSSESNKPPTTPTRHVTTRSESGNPYPT 69

Query: 701 TFV 693
           TFV
Sbjct: 70  TFV 72


>ref|XP_002893517.1| VQ motif-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339359|gb|EFH69776.1| VQ motif-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  146 bits (368), Expect(2) = 2e-41
 Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 8/142 (5%)
 Frame = -1

Query: 612 RPDPVRNLIPPIKSVTKKDKAS-------KLYERRNSLKNFKISPLVPG-GFENYSGSPR 457
           R  P    IPPIK+V  K ++S       +LYERRNS+KN KI+PL P     N + SPR
Sbjct: 97  RSTPSSFSIPPIKAVPNKKQSSSSSSSGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPR 156

Query: 456 TPEVLSPSMLKFPGLILSPVTPLILDPFNRYVNNNVSNIDMEAENKAIAHKGFYLHPSPT 277
            PE+LSPS+L FP L+LSPVTPLI DPF+R  ++N S  ++ AE KA+  +GFYLHPSP 
Sbjct: 157 KPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPA 216

Query: 276 TTPRGGSEPRLLPLFPVTSPRV 211
           TTP    EPRLLPLFPVTSPRV
Sbjct: 217 TTPM-DPEPRLLPLFPVTSPRV 237



 Score = 49.7 bits (117), Expect(2) = 2e-41
 Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
 Frame = -2

Query: 848 MENSPKLQENQNPSLIPSPNSHGSNI-----SGSTNSGHSTPV----TRSDPNNPYPTTF 696
           MENSP+ +E  N  LIPSP  H +N      S  TN   +TP     TRS+  NPYPTTF
Sbjct: 1   MENSPRYREATN--LIPSPRCHNTNSCSMSSSSETNKPPTTPTRHITTRSESGNPYPTTF 58

Query: 695 V 693
           V
Sbjct: 59  V 59


Top