BLASTX nr result

ID: Cnidium21_contig00018176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018176
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72984.1| hypothetical protein VITISV_009035 [Vitis vinifera]   134   6e-30
ref|XP_002510396.1| DNA-3-methyladenine glycosylase, putative [R...   128   4e-28
ref|XP_002282344.1| PREDICTED: DNA-3-methyladenine glycosylase 1...   127   9e-28
ref|XP_002302029.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002890343.1| predicted protein [Arabidopsis lyrata subsp....   126   2e-27

>emb|CAN72984.1| hypothetical protein VITISV_009035 [Vitis vinifera]
          Length = 353

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = -3

Query: 311 GRRGKEKNQSQSPREFPQIIKPLTAPGELENALRHLRNADPLLANLIDTYPPPTFESHHS 132
           G R  ++N +QS    P I+KPL+  GEL+ ALRHL  +DPLLA LI+T+ PPTF+S H 
Sbjct: 82  GNRAWKRNAAQSTAALPTIVKPLSCEGELDVALRHLTKSDPLLAALINTHQPPTFDSCHP 141

Query: 131 PFLSLSRSILYQQLAYKAGTSIYTRFVALCGGEDVVLPDVVLS 3
           PFL+L++SILYQQLAYKA TSIYTRFVALCGGE  V+PD VL+
Sbjct: 142 PFLALAKSILYQQLAYKAATSIYTRFVALCGGEAGVVPDAVLA 184


>ref|XP_002510396.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223551097|gb|EEF52583.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 369

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/102 (61%), Positives = 83/102 (81%), Gaps = 5/102 (4%)
 Frame = -3

Query: 293 KNQSQSPREF----PQII-KPLTAPGELENALRHLRNADPLLANLIDTYPPPTFESHHSP 129
           K ++  PR      P+II + L+  GE+ENA+RHLR ADPLL++LID +PPPTF++ H+P
Sbjct: 99  KTKTPQPRALAVAPPRIIARSLSCEGEVENAIRHLREADPLLSSLIDLHPPPTFDTFHTP 158

Query: 128 FLSLSRSILYQQLAYKAGTSIYTRFVALCGGEDVVLPDVVLS 3
           FL+L+RSILYQQLA+KAGTSIYTRF++LCGGE  V+PD VL+
Sbjct: 159 FLALTRSILYQQLAFKAGTSIYTRFISLCGGEAGVVPDTVLA 200


>ref|XP_002282344.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Vitis vinifera]
          Length = 363

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 GRRGKEKNQSQSPREFPQII-KPLTAPGELENALRHLRNADPLLANLIDTYPPPTFESHH 135
           G+  K K   Q     P ++ + L+  GE+E ALRHLRNADP LA LID +PPPTF+S H
Sbjct: 82  GKGAKNKLVPQRVPAVPNMVARALSCEGEIEIALRHLRNADPHLAPLIDLHPPPTFDSFH 141

Query: 134 SPFLSLSRSILYQQLAYKAGTSIYTRFVALCGGEDVVLPDVVLS 3
           +PFL+L++SILYQQLAYKAGTSIYTRFV LCGGE  VLP+ VL+
Sbjct: 142 TPFLALTKSILYQQLAYKAGTSIYTRFVGLCGGEAGVLPETVLA 185


>ref|XP_002302029.1| predicted protein [Populus trichocarpa] gi|222843755|gb|EEE81302.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/88 (70%), Positives = 77/88 (87%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 PQII-KPLTAPGELENALRHLRNADPLLANLIDTYPPPTFESHHSPFLSLSRSILYQQLA 87
           P+I+ + LT  GELE A+RHLRNADPLLA+LID YPPPTF++  +PFL+L+RSILYQQLA
Sbjct: 122 PRIMARSLTCEGELEIAIRHLRNADPLLASLIDIYPPPTFDTFPTPFLALARSILYQQLA 181

Query: 86  YKAGTSIYTRFVALCGGEDVVLPDVVLS 3
           +KAGTSIYTRF++LCGGE  VLP+ VL+
Sbjct: 182 FKAGTSIYTRFISLCGGEAGVLPETVLA 209


>ref|XP_002890343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336185|gb|EFH66602.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1262

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/101 (65%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = -3

Query: 302 GKEKNQSQSPREFPQI-IKPLTAPGELENALRHLRNADPLLANLIDTYPPPTFESHHSPF 126
           GK K         P+I  +PLT  GELE A+ +LRNADPLLA LID +PPPTFES  +PF
Sbjct: 111 GKGKLSQSRVITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPF 170

Query: 125 LSLSRSILYQQLAYKAGTSIYTRFVALCGGEDVVLPDVVLS 3
           L+L RSILYQQLA KAG SIYTRFVALCGGE+VV+P+ VL+
Sbjct: 171 LALIRSILYQQLATKAGNSIYTRFVALCGGENVVVPETVLA 211


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