BLASTX nr result

ID: Cnidium21_contig00018144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018144
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ric...   191   4e-47
ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_002330264.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
gb|ABF70017.1| WD-40 repeat family protein [Musa acuminata]           186   2e-45
emb|CBI40979.3| unnamed protein product [Vitis vinifera]              183   1e-44

>ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223541786|gb|EEF43334.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 448

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/128 (70%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
 Frame = -2

Query: 430 VYKRIGNLPTSKDYIKSSMNPKSYVKVSRHRNVPWIKHFDAVSCMNLDEENGLLYSGSWD 251
           V+KRIG LPT +DYI  S+NPK+YV+V RHRNV  IKHFDAVSC++L++E GLLYSGSWD
Sbjct: 182 VHKRIGGLPTFRDYITKSVNPKNYVEVRRHRNVLRIKHFDAVSCLSLNQEQGLLYSGSWD 241

Query: 250 KTVKVWRLSDLKCMESVNAHDDAVNSVAV-HDGLVFTGSADGTVKMWRREVVKKVMRHVL 74
           KT+K+WR+SD KC+ES+NAH+DA+NSVAV  D LVFTGSADGTVK+W+RE+  +  +H L
Sbjct: 242 KTLKIWRISDYKCLESINAHEDAINSVAVGFDSLVFTGSADGTVKIWKRELQGRGTKHFL 301

Query: 73  VQTLLKQE 50
           VQTLLKQE
Sbjct: 302 VQTLLKQE 309


>ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|222849484|gb|EEE87031.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/127 (70%), Positives = 107/127 (84%), Gaps = 1/127 (0%)
 Frame = -2

Query: 427 YKRIGNLPTSKDYIKSSMNPKSYVKVSRHRNVPWIKHFDAVSCMNLDEENGLLYSGSWDK 248
           YKR+G +PT KDY+KSS+NPK+YV+V RHRNV  IKHFDAVSC++L+E+ GLLYSGSWDK
Sbjct: 172 YKRVGTVPTLKDYVKSSVNPKNYVEVRRHRNVLRIKHFDAVSCLSLNEDQGLLYSGSWDK 231

Query: 247 TVKVWRLSDLKCMESVNAHDDAVNSVAV-HDGLVFTGSADGTVKMWRREVVKKVMRHVLV 71
           T+KVWR SD KC+ES+NAHDDA+NSV    D LVFTGSADGTVK+WRRE+  +   H LV
Sbjct: 232 TLKVWRTSDYKCLESINAHDDAINSVVTGFDSLVFTGSADGTVKVWRRELQGRRTGHFLV 291

Query: 70  QTLLKQE 50
           QTLLK E
Sbjct: 292 QTLLKHE 298


>ref|XP_002330264.1| predicted protein [Populus trichocarpa] gi|222871299|gb|EEF08430.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  189 bits (479), Expect = 3e-46
 Identities = 89/128 (69%), Positives = 107/128 (83%), Gaps = 1/128 (0%)
 Frame = -2

Query: 430 VYKRIGNLPTSKDYIKSSMNPKSYVKVSRHRNVPWIKHFDAVSCMNLDEENGLLYSGSWD 251
           VY+R+G LPT KD +K S+NPK+YV+V RHRNV  IKHFDAVSC++L+++ GLLYSGSWD
Sbjct: 164 VYRRVGTLPTLKDCVKGSLNPKNYVEVRRHRNVLRIKHFDAVSCLSLNQDQGLLYSGSWD 223

Query: 250 KTVKVWRLSDLKCMESVNAHDDAVNSVAV-HDGLVFTGSADGTVKMWRREVVKKVMRHVL 74
           KT+KVWR+SD KC+ES+NAHDDA+NSV    D LVFTGSADGTVK WRRE+  +  RH L
Sbjct: 224 KTLKVWRVSDYKCLESINAHDDAINSVVTGFDSLVFTGSADGTVKAWRRELQGRGTRHFL 283

Query: 73  VQTLLKQE 50
           VQTLLK E
Sbjct: 284 VQTLLKHE 291


>gb|ABF70017.1| WD-40 repeat family protein [Musa acuminata]
          Length = 465

 Score =  186 bits (471), Expect = 2e-45
 Identities = 88/130 (67%), Positives = 107/130 (82%), Gaps = 3/130 (2%)
 Frame = -2

Query: 430 VYKRIGNLPTSKDYIKSSMNPKSYVKVSRHRNVPWIKHFDAVSCMNLDEENGLLYSGSWD 251
           V++R+G LP  KD +KSS+NP +YV+V RHRNV W++HFDAVSC++LDEE G+LYSGSWD
Sbjct: 150 VHRRVGTLPRLKDLLKSSINPSNYVEVRRHRNVVWLRHFDAVSCLSLDEEAGILYSGSWD 209

Query: 250 KTVKVWRLSDLKCMESVNAHDDAVNSVAV-HDGLVFTGSADGTVKMWRREVVKK--VMRH 80
           KTVKVWR+SD KC+ES+ AHDDAVN+VA    GL+FTGSADGT K+WRRE   K    RH
Sbjct: 210 KTVKVWRISDSKCLESIKAHDDAVNAVATGFGGLLFTGSADGTAKVWRREAAGKGGATRH 269

Query: 79  VLVQTLLKQE 50
           VLVQ LL+QE
Sbjct: 270 VLVQMLLRQE 279


>emb|CBI40979.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/128 (67%), Positives = 104/128 (81%), Gaps = 1/128 (0%)
 Frame = -2

Query: 430 VYKRIGNLPTSKDYIKSSMNPKSYVKVSRHRNVPWIKHFDAVSCMNLDEENGLLYSGSWD 251
           V+KR+G LPT +DYI+SSMNP +YV+V RHRN  WIKHFDA+S ++L E+   LYS SWD
Sbjct: 142 VHKRVGTLPTFRDYIRSSMNPSNYVEVRRHRNALWIKHFDAISSLSLSEDKKFLYSASWD 201

Query: 250 KTVKVWRLSDLKCMESVNAHDDAVNS-VAVHDGLVFTGSADGTVKMWRREVVKKVMRHVL 74
           KT+KVWR+SD KC+ESVN HDDAVN+ VA  DGLVFTGSADG+VK+WRRE+  K  +H  
Sbjct: 202 KTIKVWRISDSKCLESVNVHDDAVNAVVAGFDGLVFTGSADGSVKVWRRELQAKGTKHFF 261

Query: 73  VQTLLKQE 50
            QTLLKQE
Sbjct: 262 SQTLLKQE 269


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