BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018069
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM...   258   3e-67
ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-66
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put...   247   8e-64
ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis...   243   9e-63
emb|CAA66406.1| orf12 [Arabidopsis thaliana]                          243   9e-63

>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
          Length = 505

 Score =  258 bits (660), Expect = 3e-67
 Identities = 124/156 (79%), Positives = 142/156 (91%)
 Frame = -3

Query: 473 VTMLEANHCPGAALIHFNLPSGQCYLHTGDFRASKLMQTYPLLLNQRVNVLYLDTTYCNP 294
           VT+LEANHCPGAALIHFNLP+GQ YLHTGDFRA KLMQ Y LL+NQRVNVLYLDTTYCNP
Sbjct: 252 VTLLEANHCPGAALIHFNLPNGQRYLHTGDFRACKLMQAYHLLVNQRVNVLYLDTTYCNP 311

Query: 293 KYRFPLKEEVLNFVVKVTKNILKKQPKTLIIVGAYSIGKESVYLAISKALMVKIHADSSR 114
           KYRFP KEEVLN+VVK+TKN LK  P+TL++VGAYSIGKE VYLAISKAL VKI+A++SR
Sbjct: 312 KYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASR 371

Query: 113 RRILKSFGWPEISGSLCTDGNDTPLHVLPMSSLKFE 6
           RRIL++FGWP++S  LCT+GN+T LHVLPMSSL+ E
Sbjct: 372 RRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSLRVE 407


>ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|222861836|gb|EEE99378.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  256 bits (654), Expect = 1e-66
 Identities = 121/156 (77%), Positives = 143/156 (91%)
 Frame = -3

Query: 473 VTMLEANHCPGAALIHFNLPSGQCYLHTGDFRASKLMQTYPLLLNQRVNVLYLDTTYCNP 294
           VT+LEANHCPGAAL+HF LP+G CYLHTGDFRASKLMQ +PLL N RVNVLYLDTTYCNP
Sbjct: 129 VTLLEANHCPGAALLHFRLPTGLCYLHTGDFRASKLMQAHPLLANNRVNVLYLDTTYCNP 188

Query: 293 KYRFPLKEEVLNFVVKVTKNILKKQPKTLIIVGAYSIGKESVYLAISKALMVKIHADSSR 114
           KY+FP KE+VL++VV+VTK+ LKKQPKTL++VGAYSIGKESVYLAISKAL VKI+A++SR
Sbjct: 189 KYKFPSKEDVLSYVVRVTKSSLKKQPKTLVVVGAYSIGKESVYLAISKALGVKIYANNSR 248

Query: 113 RRILKSFGWPEISGSLCTDGNDTPLHVLPMSSLKFE 6
           RRIL+SFGWP++S +LCT   DT LHVLP+SSL++E
Sbjct: 249 RRILQSFGWPDLSTNLCTKAIDTCLHVLPISSLRYE 284


>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223547811|gb|EEF49303.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 493

 Score =  247 bits (630), Expect = 8e-64
 Identities = 116/156 (74%), Positives = 140/156 (89%)
 Frame = -3

Query: 473 VTMLEANHCPGAALIHFNLPSGQCYLHTGDFRASKLMQTYPLLLNQRVNVLYLDTTYCNP 294
           VT+LEANHCPGAAL+HF L +G CYLHTGDFRASK+MQ+Y LL+NQ+VN LYLDTTYCNP
Sbjct: 240 VTLLEANHCPGAALLHFRLSNGLCYLHTGDFRASKVMQSYHLLVNQKVNALYLDTTYCNP 299

Query: 293 KYRFPLKEEVLNFVVKVTKNILKKQPKTLIIVGAYSIGKESVYLAISKALMVKIHADSSR 114
           KY+FP KE+VLN+VV+VTK+ LK+QP+TLI+VGAYSIGKE VYL+ISKAL VKI+A +SR
Sbjct: 300 KYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVGAYSIGKECVYLSISKALGVKIYASASR 359

Query: 113 RRILKSFGWPEISGSLCTDGNDTPLHVLPMSSLKFE 6
           R+IL+SFGW ++S SLCT   DTPLHVLP+SSL+ E
Sbjct: 360 RQILESFGWSDLSRSLCTQPKDTPLHVLPISSLRVE 395


>ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
           gi|30688447|ref|NP_850635.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
           gi|79313637|ref|NP_001030773.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
           gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA
           cross-link repair protein SNM1; Short=AtSNM1
           gi|1402886|emb|CAA66817.1| hypothetical protein
           [Arabidopsis thaliana] gi|11994302|dbj|BAB01732.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis
           thaliana] gi|28827378|gb|AAO50533.1| unknown protein
           [Arabidopsis thaliana] gi|332643675|gb|AEE77196.1| DNA
           cross-link repair protein SNM1 [Arabidopsis thaliana]
           gi|332643676|gb|AEE77197.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
           gi|332643677|gb|AEE77198.1| DNA cross-link repair
           protein SNM1 [Arabidopsis thaliana]
          Length = 484

 Score =  243 bits (621), Expect = 9e-63
 Identities = 117/156 (75%), Positives = 138/156 (88%)
 Frame = -3

Query: 473 VTMLEANHCPGAALIHFNLPSGQCYLHTGDFRASKLMQTYPLLLNQRVNVLYLDTTYCNP 294
           VT++EANHCPGAALIHF L  G CYLHTGDFRASK MQT+PLL NQRV+VLYLDTTYCNP
Sbjct: 231 VTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLLFNQRVHVLYLDTTYCNP 290

Query: 293 KYRFPLKEEVLNFVVKVTKNILKKQPKTLIIVGAYSIGKESVYLAISKALMVKIHADSSR 114
           +Y+FP KE+VL++VV++TK+ L+KQPKTLI+VG+YSIGKE VYLAI+KAL VKI A++SR
Sbjct: 291 RYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASR 350

Query: 113 RRILKSFGWPEISGSLCTDGNDTPLHVLPMSSLKFE 6
           RRIL+SFGW +IS +L TDG  T LHVLPMSSLK E
Sbjct: 351 RRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVE 386


>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
          Length = 484

 Score =  243 bits (621), Expect = 9e-63
 Identities = 117/156 (75%), Positives = 138/156 (88%)
 Frame = -3

Query: 473 VTMLEANHCPGAALIHFNLPSGQCYLHTGDFRASKLMQTYPLLLNQRVNVLYLDTTYCNP 294
           VT++EANHCPGAALIHF L  G CYLHTGDFRASK MQT+PLL NQRV+VLYLDTTYCNP
Sbjct: 231 VTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLLFNQRVHVLYLDTTYCNP 290

Query: 293 KYRFPLKEEVLNFVVKVTKNILKKQPKTLIIVGAYSIGKESVYLAISKALMVKIHADSSR 114
           +Y+FP KE+VL++VV++TK+ L+KQPKTLI+VG+YSIGKE VYLAI+KAL VKI A++SR
Sbjct: 291 RYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASR 350

Query: 113 RRILKSFGWPEISGSLCTDGNDTPLHVLPMSSLKFE 6
           RRIL+SFGW +IS +L TDG  T LHVLPMSSLK E
Sbjct: 351 RRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVE 386