BLASTX nr result

ID: Cnidium21_contig00018054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018054
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin...   120   2e-25
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   120   2e-25
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   119   3e-25
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin...   112   2e-23
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin...   112   3e-23

>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
           [Vitis vinifera]
          Length = 481

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 11/97 (11%)
 Frame = +2

Query: 5   NFLGLPMRVGEKECPYYMKTSSCKYGSNCRFNHPDPTVVGG---------GDSAP-QGSM 154
           NFLGLP+R+GEKECPYYM+T SCKYG+NCRFNHPDPT  GG         G S P QG+ 
Sbjct: 217 NFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGAS 276

Query: 155 KDTIPGWSSARTLNENAPYMPVMYPPSP-TAPPNGKW 262
           +  +  WSS R LNE AP++P+M+ P+    PPN +W
Sbjct: 277 QSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEW 313


>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
           [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
           protein product [Vitis vinifera]
          Length = 484

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 11/97 (11%)
 Frame = +2

Query: 5   NFLGLPMRVGEKECPYYMKTSSCKYGSNCRFNHPDPTVVGG---------GDSAP-QGSM 154
           NFLGLP+R+GEKECPYYM+T SCKYG+NCRFNHPDPT  GG         G S P QG+ 
Sbjct: 217 NFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGAS 276

Query: 155 KDTIPGWSSARTLNENAPYMPVMYPPSP-TAPPNGKW 262
           +  +  WSS R LNE AP++P+M+ P+    PPN +W
Sbjct: 277 QSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEW 313


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 570

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 11/97 (11%)
 Frame = +2

Query: 5   NFLGLPMRVGEKECPYYMKTSSCKYGSNCRFNHPDPTVVGGGDS----------APQGSM 154
           NFLGLP+RVGEKEC YYM+T SCK+G+NCRFNHPDPT VGGGDS          + QG  
Sbjct: 319 NFLGLPIRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGNGSSISLQGVS 378

Query: 155 KDTIPGWSSARTLNENAPYMPVMYPPSP-TAPPNGKW 262
           + +I  WSS R LNE+AP++PV+  P+P  +P + +W
Sbjct: 379 QSSISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEW 415


>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 490

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 12/89 (13%)
 Frame = +2

Query: 5   NFLGLPMRVGEKECPYYMKTSSCKYGSNCRFNHPDPTVVGGGDSAP------------QG 148
           NFLGLP+R GE+ECPYYM+T SCK+G+NC+FNHPDPT VGGG   P            QG
Sbjct: 231 NFLGLPIRPGERECPYYMRTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISLQG 290

Query: 149 SMKDTIPGWSSARTLNENAPYMPVMYPPS 235
             + ++P WSS RTLNE +P++P+M  P+
Sbjct: 291 VSQTSVPSWSSPRTLNEASPFVPMMLSPT 319


>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 501

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 12/89 (13%)
 Frame = +2

Query: 5   NFLGLPMRVGEKECPYYMKTSSCKYGSNCRFNHPDPTVVG--GGDSAP----------QG 148
           NFLGLP+R+GE+ECPYYM+T SCK+G+NC+FNHPDPT VG  GGD A           QG
Sbjct: 241 NFLGLPIRLGERECPYYMRTGSCKFGANCKFNHPDPTAVGGVGGDPASGYGNGGSISLQG 300

Query: 149 SMKDTIPGWSSARTLNENAPYMPVMYPPS 235
             + ++P WSS RTLNE++P++P+M  P+
Sbjct: 301 VSQTSVPSWSSPRTLNESSPFVPMMLSPT 329


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