BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018048
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   183   3e-44
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   160   3e-37
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   160   3e-37
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   159   5e-37
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   159   5e-37

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  183 bits (465), Expect = 3e-44
 Identities = 83/151 (54%), Positives = 111/151 (73%)
 Frame = -1

Query: 804  LKSVVQAIPTYAMQCFKIPEGILDNMNSSCRNFLWGQKSDEKKLALISWRKLC*PKDKGG 625
            +K+V QAIPTYAMQCF IP+ I+D +   CRNF WGQK +E+++A ++W KL  PK +GG
Sbjct: 802  IKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGG 861

Query: 624  LGMRYLSAFNKALLAKQCWRLVSNPNSFAASVLKG*YFPRSSFWEAKVPPNASYTWRSII 445
            LG+R    FN+ALLAKQ WR+++ P+S  A V+KG YFPRS+F EA+V PN S+T +SI+
Sbjct: 862  LGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSIL 921

Query: 444  SARDLLARGTRWIIQDGRTTHFWKDSWVPDL 352
            SAR ++ +G   +I DGR T  W D WVP L
Sbjct: 922  SARAVIQKGMCRVIGDGRDTTIWGDPWVPSL 952



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
 Frame = -2

Query: 239  CPR--------SHIMLQCRDSQLLWRMSPARLENINTLDCSFMKWCGIFITKCNLNRSWE 84
            CPR         H++  C +S   W +SP R+   N    SF  W    +        W 
Sbjct: 1092 CPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDTEWWA 1151

Query: 83   IFMMFVWQIWQLRNLWVFEKKKL 15
            +F M  W IW  RN WVFEKKKL
Sbjct: 1152 LFWMICWNIWLGRNKWVFEKKKL 1174


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  160 bits (405), Expect = 3e-37
 Identities = 71/149 (47%), Positives = 100/149 (67%)
 Frame = -1

Query: 804  LKSVVQAIPTYAMQCFKIPEGILDNMNSSCRNFLWGQKSDEKKLALISWRKLC*PKDKGG 625
            LK+V QAIP Y M CF+IP  I + M +   +  WG +  +KK+   SW  L  PK  GG
Sbjct: 808  LKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGG 867

Query: 624  LGMRYLSAFNKALLAKQCWRLVSNPNSFAASVLKG*YFPRSSFWEAKVPPNASYTWRSII 445
            +G R  + FN+A+L +QCWRL+++P+S  + VLKG YFP SSFWEA  P + S+TWRS++
Sbjct: 868  MGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLL 927

Query: 444  SARDLLARGTRWIIQDGRTTHFWKDSWVP 358
              R+LLA+G RW + DG+T   + D+W+P
Sbjct: 928  FGRELLAKGVRWGVGDGKTIKIFSDNWIP 956


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  160 bits (405), Expect = 3e-37
 Identities = 71/149 (47%), Positives = 100/149 (67%)
 Frame = -1

Query: 804  LKSVVQAIPTYAMQCFKIPEGILDNMNSSCRNFLWGQKSDEKKLALISWRKLC*PKDKGG 625
            LK+V QAIP Y M CF+IP  I + M +   +  WG +  +KK+   SW  L  PK  GG
Sbjct: 765  LKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGG 824

Query: 624  LGMRYLSAFNKALLAKQCWRLVSNPNSFAASVLKG*YFPRSSFWEAKVPPNASYTWRSII 445
            +G R  + FN+A+L +QCWRL+++P+S  + VLKG YFP SSFWEA  P + S+TWRS++
Sbjct: 825  MGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLL 884

Query: 444  SARDLLARGTRWIIQDGRTTHFWKDSWVP 358
              R+LLA+G RW + DG+T   + D+W+P
Sbjct: 885  FGRELLAKGVRWGVGDGKTIKIFSDNWIP 913


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  159 bits (403), Expect = 5e-37
 Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 7/183 (3%)
 Frame = -1

Query: 804 LKSVVQAIPTYAMQCFKIPEGILDNMNSSCRNFLWGQKSDEKKLALISWRKLC*PKDKGG 625
           +KSV QAIPTY M CF++P+G+   + S   NF WGQK + +K+   SW++LC  K +GG
Sbjct: 42  IKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQKEETRKIHWTSWKQLCKSKLRGG 101

Query: 624 LGMRYLSAFNKALLAKQCWRLVSNPNSFAASVLKG*YFPRSSFWEAKVPPNASYTWRSII 445
           +G R L  FN ALLAKQCWRL   P S  A V K  YFP++SF +A V  N S+TWRSI+
Sbjct: 102 MGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIV 161

Query: 444 SARDLLARGTRWIIQDGRTTHFWKDSWVPD-------LPGG*IYSPPPLGDLGNSSVAEW 286
            +R LL  G RW + +G +     D WVP        LP   +     + DL +S    W
Sbjct: 162 GSRRLLNAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSDDARVSDLIDSEKGAW 221

Query: 285 RND 277
            ++
Sbjct: 222 YDE 224


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  159 bits (403), Expect = 5e-37
 Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 7/183 (3%)
 Frame = -1

Query: 804 LKSVVQAIPTYAMQCFKIPEGILDNMNSSCRNFLWGQKSDEKKLALISWRKLC*PKDKGG 625
           +KSV QAIPTY M CF++P+G+   + S   NF W QK + +K+   SW++LC  K +GG
Sbjct: 42  IKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGG 101

Query: 624 LGMRYLSAFNKALLAKQCWRLVSNPNSFAASVLKG*YFPRSSFWEAKVPPNASYTWRSII 445
           +G R L  FN ALLAKQCWRLV  P S  A V K  YFP++SF +A V  N S+TWRSI+
Sbjct: 102 MGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIV 161

Query: 444 SARDLLARGTRWIIQDGRTTHFWKDSWVPD-------LPGG*IYSPPPLGDLGNSSVAEW 286
            +R LL  G RW + +G +     D WVP        LP   +     + DL +S    W
Sbjct: 162 GSRSLLNAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSDDARVSDLIDSEKGAW 221

Query: 285 RND 277
            ++
Sbjct: 222 YDE 224