BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018015
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    71   4e-10
gb|ABN08768.1| Polynucleotidyl transferase, Ribonuclease H fold ...    66   1e-08
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    65   2e-08
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          65   3e-08
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    65   3e-08

>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
 Frame = +1

Query: 7    LVYWRKPPEGFIALNIHGASQN--GIAAGGGVLRNHAGEHLSNFYNNYGRVSNDFAESKA 180
            ++ WRKP EG++ +N  GAS    G A  GGV+R+  G  L  F  N G  S   AE   
Sbjct: 505  MIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWG 564

Query: 181  ILDGLSVCKELGYNKIQIQTDSAQAALWFHRQLTLTVPLELQTIWNEIYRFQDMLSIEIL 360
            +  GL V  E G+ +++++ DSA    +    +  + PL         +  +D + + I 
Sbjct: 565  VYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWI-VRIT 623

Query: 361  HIYEEGNKLAEHISKKG-TLSEGMGSINISQETSARYHLTADKMGMSYLRKLK 516
            H+Y E N+LA+ ++    TL  G   ++   E  +   L  D MG S+ R ++
Sbjct: 624  HVYREANRLADGLANYAFTLPFGFLLLDSCPEHVSSI-LLEDVMGTSFPRHVR 675


>gb|ABN08768.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 275

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
 Frame = +1

Query: 10  VYWRKPPEGFIALNIHGASQNGIAAG-GGVLRNHAGEHLSNFYNNYGRVSNDFAESKAIL 186
           V W+KP  G+I LN   AS+  I  G GG+ RN  G+ +S F +N  R +   +E   + 
Sbjct: 123 VMWKKPEGGWIRLNTDVASKRDIPTGSGGLFRNAEGKWISGFSHNLSRCNAYLSELCGVF 182

Query: 187 DGLSVCKELGYNKIQIQTDSAQAALWFHRQLTLTVPLELQTIWNEIYRFQDMLSIEILHI 366
           DGL + +E G++K+++  DS+   +W       T+       W           ++I H 
Sbjct: 183 DGLQIARERGFSKVELHVDSS-VVVW-------TLQTTKDGSW----------EVKICHS 224

Query: 367 YEEGNKLAEHISKKGTLSEGMGSINISQETSARYH--LTADKMGMSYLR 507
           Y E N  A+ ++      E    + + ++  AR    L AD MG++  R
Sbjct: 225 YREVNSCADTLANMD--CEHAPGLRVYEQCPARLSSMLLADVMGITTSR 271


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
 Frame = +1

Query: 7   LVYWRKPPEGFIALNIHGASQN--GIAAGGGVLRNHAGEHLSNFYNNYGRVSNDFAESKA 180
           L+ W KP EG+  LN  GAS+   G+A+ GGVLR+  G     F  N G  S   AE   
Sbjct: 143 LIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWG 202

Query: 181 ILDGLSVCKELGYNKIQIQTDSAQAALWFHRQLTLTVPLELQTIWNEIYRFQDMLSIEIL 360
           +  GL +  E    +++I+ DS     +    +    PL         +  +D   + I 
Sbjct: 203 VYYGLYIAWERRVTRLEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHDFISRDW-RVRIS 261

Query: 361 HIYEEGNKLAEHISKKG-TLSEGMGSINISQETSARYHLTADKMGMSYLRKLK 516
           H+Y E N+LA+ ++    +L  G  S+++  + S R+ L  D  G +  R+++
Sbjct: 262 HVYREANRLADGLANYAFSLPLGFHSLSLVPD-SLRFILLDDTSGATVSRQVR 313


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
 Frame = +1

Query: 7   LVYWRKPPEGFIALNIHGASQN--GIAAGGGVLRNHAGEHLSNFYNNYGRVSNDFAESKA 180
           L+ W KP EG+  LN  GAS+   G+A+ GGVLR+  G     F  N G  S   AE   
Sbjct: 143 LIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWG 202

Query: 181 ILDGLSVCKELGYNKIQIQTDSAQAALWFHRQLTLTVPLELQTIWNEIYRFQDMLSIEIL 360
           +  GL +  E    +++I+ DS     +    +    PL         +  +D   + I 
Sbjct: 203 VYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDW-RVRIS 261

Query: 361 HIYEEGNKLAEHISKKG-TLSEGMGSINISQETSARYHLTADKMGMSYLRKLK 516
           H+Y E N+LA+ ++    +L  G  S+++  + S R+ L  D  G +  R+++
Sbjct: 262 HVYREANRLADGLANYAFSLPLGFHSLSLVPD-SLRFILLDDTSGATVSRQVR 313


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
 Frame = +1

Query: 7   LVYWRKPPEGFIALNIHGASQN--GIAAGGGVLRNHAGEHLSNFYNNYGRVSNDFAESKA 180
           L+ W KP EG+  LN  GAS+   G+A+ GGVLR+  G     F  N G  S   AE   
Sbjct: 143 LIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWG 202

Query: 181 ILDGLSVCKELGYNKIQIQTDSAQAALWFHRQLTLTVPLELQTIWNEIYRFQDMLSIEIL 360
           +  GL +  E    +++I+ DS     +    +    PL         +  +D   + I 
Sbjct: 203 VYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDW-RVRIS 261

Query: 361 HIYEEGNKLAEHISKKG-TLSEGMGSINISQETSARYHLTADKMGMSYLRKLK 516
           H+Y E N+LA+ ++    +L  G  S+++  + S R+ L  D  G +  R+++
Sbjct: 262 HVYREANRLADGLANYAFSLPLGFHSLSLVPD-SLRFILLDDTSGATVSRQVR 313