BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00018001
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   210   3e-52
ref|XP_003539544.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   187   2e-45
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   182   6e-44
ref|XP_003541894.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   181   2e-43
ref|XP_003636091.1| RING finger family protein [Medicago truncat...   173   3e-41

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  210 bits (534), Expect = 3e-52
 Identities = 120/237 (50%), Positives = 149/237 (62%), Gaps = 15/237 (6%)
 Frame = -3

Query: 678 ENSSGGSTMDIHDDDDGRSYNVSGKIMVTAIISLSFXXXXXXXLHIYVRCVLRRQARHRT 499
           EN    S + +H D    +Y+++ KIM+ AI SLSF       LHIY RCVLRRQAR R 
Sbjct: 26  ENEGEDSPLFVHRD----TYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERA 81

Query: 498 SLWQIGLFATAPEPPKTGLDETIIGSLPTFVFKQ---DQKPRTIECTVCLSNLEDGEMIR 328
           ++ ++GL     EPPKTGLD  +I SLP FV+KQ   DQ+    EC VCLS L+D EM R
Sbjct: 82  NIRRLGLATATSEPPKTGLDPVVIASLPIFVYKQSNGDQEDNDQECAVCLSVLQDQEMAR 141

Query: 327 ILPNCKHNFHVACIDTWLSTNSTCPVCRTGVEPPVEVVVQANEPEGDVP---EPTAPPLD 157
            LPNCKH FH  CID WL+++STCP+CRT  EP     +Q    EG VP     TAPPL+
Sbjct: 142 SLPNCKHTFHAECIDKWLTSHSTCPICRTEAEPR----IQPEPREGPVPAGGAATAPPLE 197

Query: 156 HEIAEGIAE-----GSGKVNGSSSRLSSFRKMLSRDRSSRRIHAGL----VDDLERQ 13
               EG +E      S K +GS SRLSSFR++LSR+RSSRRI +      ++DLERQ
Sbjct: 198 QVGTEGTSESGNQSSSNKASGSISRLSSFRRILSRERSSRRIQSETQEQGLEDLERQ 254


>ref|XP_003539544.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Glycine max]
          Length = 239

 Score =  187 bits (475), Expect = 2e-45
 Identities = 116/232 (50%), Positives = 147/232 (63%), Gaps = 21/232 (9%)
 Frame = -3

Query: 645 HDDDDGRSYNVSGKIMVTAIISLSFXXXXXXXLHIYVRCVLRRQARHRTSLWQIGL-FAT 469
           HD DD      + +I++ AI+SLS        LH+Y R  LRRQ R R +++Q+ L  A 
Sbjct: 14  HDHDD-----FNRRILIMAIVSLSVVLVLVFALHLYARVFLRRQTRRRAAIYQLSLNVAQ 68

Query: 468 APEPP--KTGLDETIIGSLPTFVFKQDQKPRTIECTVCLSNLEDGEMIRILPNCKHNFHV 295
           A   P   TGL+  +I +LPTF FKQ+Q   + EC VCLS LEDGE +R+LPNCKH+FHV
Sbjct: 69  AHAEPHNNTGLNPALITTLPTFPFKQNQHHDSAECAVCLSVLEDGEHVRLLPNCKHSFHV 128

Query: 294 ACIDTWLSTNSTCPVCRTGVEP----PVEVVVQANE-PEG----DVPEPTAPPLDHEIAE 142
           +CIDTWLS++STCP+CRT   P    PV +  Q  E P G    DV  PTAP L  E  E
Sbjct: 129 SCIDTWLSSHSTCPICRTKAGPVQLEPVRLEPQPREGPTGLVLADVVAPTAPLL-FENVE 187

Query: 141 GIAE-----GSGKVNGSSSRLSSFRKMLSRDRSSRRI----HAGLVDDLERQ 13
           G ++     GS KV+GS+SRLSSFR++LSR+RS RRI    H  +  DLERQ
Sbjct: 188 GTSDGANNNGSPKVSGSNSRLSSFRRILSRERSMRRILPSSHDDVEHDLERQ 239


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  182 bits (462), Expect = 6e-44
 Identities = 111/241 (46%), Positives = 139/241 (57%), Gaps = 31/241 (12%)
 Frame = -3

Query: 642 DDDDGRSYNVS--------GKIMVTAIISLSFXXXXXXXLHIYVRCVLRRQARHRTSLWQ 487
           DDDD  SY  S         KIM+TAI+SLS        LHIY RCVLRR+AR R++L  
Sbjct: 11  DDDDNGSYTTSHKSSSDLNSKIMLTAIVSLSVVIALVITLHIYARCVLRRRARRRSALLS 70

Query: 486 IGLFAT-APEPPKTGLDETIIGSLPTFVFKQD---QKPRTIECTVCLSNLEDGEMIRILP 319
           I L    + EPPKTGLD+++I SLP F F ++   ++  T +C VCLS LE+GE+ R+LP
Sbjct: 71  ITLSRVHSDEPPKTGLDQSVIDSLPMFKFSENDTQEEGGTTDCAVCLSVLEEGEIARLLP 130

Query: 318 NCKHNFHVACIDTWLSTNSTCPVCRTGVEP-----PVEVVVQANEPEGDVPEPTAPPLD- 157
           NCKH FH  CID WL T+STCP+CRT  EP     P E +V        VP   APP D 
Sbjct: 131 NCKHTFHAECIDKWLGTHSTCPICRTEAEPRLQPEPREAMVMIR----TVPPAPAPPSDG 186

Query: 156 ---------HEIAEGIAEGSGKVNGSSSRLSSFRKMLSRDRSSRRIHAGL----VDDLER 16
                       +EG A+ S K   S+SRLSSFR+MLSR  S      G     ++D+ER
Sbjct: 187 TNSSSLACSEGTSEGAAQCSAKSGASTSRLSSFRRMLSRGSSRTTQSCGAPEDGIEDVER 246

Query: 15  Q 13
           +
Sbjct: 247 R 247


>ref|XP_003541894.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Glycine max]
          Length = 229

 Score =  181 bits (458), Expect = 2e-43
 Identities = 115/231 (49%), Positives = 145/231 (62%), Gaps = 18/231 (7%)
 Frame = -3

Query: 651 DIHDDDDGRSYN-VSGKIMVTAIISLSFXXXXXXXLHIYVRCVLRRQARHRTSLWQIGL- 478
           D HD D    +N  + +I++ AI+SLS        LH+Y R  LRR+A    +++Q+ L 
Sbjct: 6   DDHDHDTFHDHNDFNRRILIMAIVSLSVVLVLVFTLHLYARFFLRRRA----AIYQLSLN 61

Query: 477 --FATAPEPPKTGLDETIIGSLPTFVFKQDQKPRTIECTVCLSNLEDGEMIRILPNCKHN 304
              A A     TGLD  +I +LPTF FKQ     ++ECTVCLS LEDGE +R+LPNCKH+
Sbjct: 62  VAHAHAEPDNNTGLDPVLITTLPTFPFKQPNND-SVECTVCLSVLEDGEQVRLLPNCKHS 120

Query: 303 FHVACIDTWLSTNSTCPVCRTGVEPPVEVVVQANE-PEG----DVPEPTAPPLDHEIAEG 139
           FHV CIDTWL+++STCP+CRT  E PV +  Q  E P G    DV  PTAP L  E  EG
Sbjct: 121 FHVGCIDTWLASHSTCPICRTKAE-PVRLEPQPREGPTGSVLLDVVAPTAPLL-FENVEG 178

Query: 138 IAE-----GSGKVNGSSSRLSSFRKMLSRDRSSRRI----HAGLVDDLERQ 13
             +     GS KV+GS+SRLSSFR++LSRDRS RRI    H  +  DLERQ
Sbjct: 179 TLDGANNNGSPKVSGSNSRLSSFRRILSRDRSMRRIQPSSHDDVEHDLERQ 229


>ref|XP_003636091.1| RING finger family protein [Medicago truncatula]
           gi|355502026|gb|AES83229.1| RING finger family protein
           [Medicago truncatula] gi|388522379|gb|AFK49251.1|
           unknown [Medicago truncatula]
          Length = 239

 Score =  173 bits (439), Expect = 3e-41
 Identities = 108/241 (44%), Positives = 140/241 (58%), Gaps = 30/241 (12%)
 Frame = -3

Query: 645 HDDDD----GRSY------NVSGKIMVTAIISLSFXXXXXXXLHIYVRCVLRRQARHRTS 496
           HDD D    G  Y      N + KI++TAI+SL+        LH+Y R VL+RQAR R +
Sbjct: 10  HDDHDYYPFGNFYRGSSQSNFNKKILLTAIVSLALVLILVLALHLYARYVLKRQARRRAA 69

Query: 495 LWQIGLFATAP-----EPPKTGLDETIIGSLPTFVFKQDQKPRT-------IECTVCLSN 352
           + Q+ L          EP  TG+D TII +LPTF+FKQ Q+          +EC VCLS 
Sbjct: 70  IQQLSLTVAQAHTQFAEPANTGVDPTIIAALPTFLFKQKQQEENKNVSKNIVECAVCLSV 129

Query: 351 LEDGEMIRILPNCKHNFHVACIDTWLSTNSTCPVCRTGVEPPVEVVVQANEPEGDVPEPT 172
           +ED EM+R+LPNCKH+FHV CID WL+++STCP CRT VEP          PE +  E  
Sbjct: 130 VEDEEMMRLLPNCKHSFHVGCIDKWLASHSTCPNCRTKVEP---------RPEAEPRE-- 178

Query: 171 APPLDHEIAEGIAEGSGKVNGSSSRLSSFRKMLSRDRSSRRIHAG-------LVD-DLER 16
            P L    +EG ++G      + SRLSSFR++L+RDRSSRRI          ++D DLER
Sbjct: 179 GPTLFISPSEGTSDGGSVSPKNISRLSSFRRILTRDRSSRRIQPSSTPREDIIIDRDLER 238

Query: 15  Q 13
           Q
Sbjct: 239 Q 239