BLASTX nr result

ID: Cnidium21_contig00017993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017993
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284157.1| PREDICTED: uncharacterized protein LOC100250...   119   3e-25
ref|XP_002516568.1| lupus la ribonucleoprotein, putative [Ricinu...   117   1e-24
emb|CAN66913.1| hypothetical protein VITISV_007260 [Vitis vinifera]   117   1e-24
ref|XP_003522692.1| PREDICTED: uncharacterized protein LOC100803...   109   2e-22
ref|XP_003526475.1| PREDICTED: lupus La protein homolog A-like [...   105   3e-21

>ref|XP_002284157.1| PREDICTED: uncharacterized protein LOC100250699 [Vitis vinifera]
          Length = 475

 Score =  119 bits (298), Expect = 3e-25
 Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
 Frame = -1

Query: 488 DEKTENVKVKKESTEENILTKSEEMVEDEPTLESD--QAENGKESLDIPIQKEEAKAGTE 315
           D+ +EN+   +E++ E+I  +SEE VE++ +LES+  + E+G++S +    K E KA  E
Sbjct: 277 DKASENINNDEENSGEDIEKESEEKVEEKTSLESEGKETEDGQKSSEGCDLKGEEKATGE 336

Query: 314 GNSAATMYKDNKDVVLREDLXXXXXXXXXXXFIDFTMGAESGYIRFXXXXXXXXXXXXXX 135
               A  YKDN DVV+REDL           F+DF +G ESGYIR+              
Sbjct: 337 QKPTAATYKDNMDVVMREDLKSVFQKFGTVKFVDFKIGEESGYIRYDEPEAAQKVRAAAV 396

Query: 134 XXXXXGLMVKNYIAILDPVTGEAEKTYWDLLRGNQEKYK 18
                GL VKNYIA L+PVTGEAE+ YW LLRGNQEK++
Sbjct: 397 LSEEGGLTVKNYIANLEPVTGEAEREYWSLLRGNQEKHR 435


>ref|XP_002516568.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223544388|gb|EEF45909.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 494

 Score =  117 bits (292), Expect = 1e-24
 Identities = 70/159 (44%), Positives = 88/159 (55%)
 Frame = -1

Query: 479 TENVKVKKESTEENILTKSEEMVEDEPTLESDQAENGKESLDIPIQKEEAKAGTEGNSAA 300
           +ENV   KE+ E NI    EE ++ E   ES   E   +S + PI KE+ K   E +  A
Sbjct: 308 SENVSADKENHEMNIEEVKEEKIDGENGSESKGTETEGKSSEDPIAKEKKK---EEHVKA 364

Query: 299 TMYKDNKDVVLREDLXXXXXXXXXXXFIDFTMGAESGYIRFXXXXXXXXXXXXXXXXXXX 120
             Y+DN +VV+REDL           +IDF +G ESGY+RF                   
Sbjct: 365 DSYRDNMNVVMREDLKAIFEKFGTVKYIDFKIGEESGYVRFEQPEAAQKARAAAVLAKDG 424

Query: 119 GLMVKNYIAILDPVTGEAEKTYWDLLRGNQEKYKDRMDN 3
           GL VKN+IAIL+PVTGEAEK YW LLRGNQEK++  M N
Sbjct: 425 GLAVKNFIAILEPVTGEAEKEYWSLLRGNQEKHRGNMGN 463


>emb|CAN66913.1| hypothetical protein VITISV_007260 [Vitis vinifera]
          Length = 475

 Score =  117 bits (292), Expect = 1e-24
 Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
 Frame = -1

Query: 488 DEKTENVKVKKESTEENILTKSEEMVEDEPTLESD--QAENGKESLDIPIQKEEAKAGTE 315
           D+ +EN    +E++ E+I  +SEE VE++ +LES+  + E+G +S +    K E KA  E
Sbjct: 277 DKASENXNNDEENSGEDIEKESEEKVEEKTSLESEGKETEDGXKSSEGCDLKGEEKATGE 336

Query: 314 GNSAATMYKDNKDVVLREDLXXXXXXXXXXXFIDFTMGAESGYIRFXXXXXXXXXXXXXX 135
               A  YKDN DVV+REDL           F+DF +G ESGYIR+              
Sbjct: 337 QKPTAATYKDNMDVVMREDLKSVFQKFGTVKFVDFKIGEESGYIRYDEPEAAQKARAAAV 396

Query: 134 XXXXXGLMVKNYIAILDPVTGEAEKTYWDLLRGNQEKYK 18
                GL VKNYIA L+PVTGEAE+ YW LLRGNQEK++
Sbjct: 397 LSEEGGLTVKNYIANLEPVTGEAEREYWSLLRGNQEKHR 435


>ref|XP_003522692.1| PREDICTED: uncharacterized protein LOC100803099 [Glycine max]
          Length = 488

 Score =  109 bits (273), Expect = 2e-22
 Identities = 76/177 (42%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
 Frame = -1

Query: 494 QTDEK-TENVKVKKESTE-----ENILTKSEEMVEDEPTLESDQAE----NGKESLDI-- 351
           + D+K TENV V +E  E     E +  +  EM E E T   D  +     G ES D   
Sbjct: 274 ENDQKVTENVGVDEEKNEMKEAKETVNEEDNEMKEAEETESEDNTDMKEAKGTESEDNNG 333

Query: 350 ----PIQKEEAKAGTEGNS-AATMYKDNKDVVLREDLXXXXXXXXXXXFIDFTMGAESGY 186
                + K+E K    G   +A  YKDN DVV REDL           +IDF +GAESGY
Sbjct: 334 MKEGKVTKDEEKKQQAGEKFSAAAYKDNMDVVSREDLKSVFEKFGTVKYIDFKIGAESGY 393

Query: 185 IRFXXXXXXXXXXXXXXXXXXXGLMVKNYIAILDPVTGEAEKTYWDLLRGNQEKYKD 15
           IRF                   GL+VKNYIAILDPVTGEAEK YW LLRGNQ K+++
Sbjct: 394 IRFEETEAAQKARAAAVISEKDGLVVKNYIAILDPVTGEAEKEYWSLLRGNQGKHRE 450


>ref|XP_003526475.1| PREDICTED: lupus La protein homolog A-like [Glycine max]
          Length = 460

 Score =  105 bits (263), Expect = 3e-21
 Identities = 69/155 (44%), Positives = 84/155 (54%)
 Frame = -1

Query: 479 TENVKVKKESTEENILTKSEEMVEDEPTLESDQAENGKESLDIPIQKEEAKAGTEGNSAA 300
           TENV       EEN  TK  +  E E   E++  + GK +     + E+ K    G  +A
Sbjct: 280 TENVG----DDEENSETKEAKETESE---ENNGMKEGKVT-----EGEDKKRQAGGKFSA 327

Query: 299 TMYKDNKDVVLREDLXXXXXXXXXXXFIDFTMGAESGYIRFXXXXXXXXXXXXXXXXXXX 120
             YKDN DVV REDL           +IDF +GAESGYIRF                   
Sbjct: 328 AAYKDNMDVVSREDLKSVFEKFGTVKYIDFKIGAESGYIRFEETEAAQKARAAAVISEKD 387

Query: 119 GLMVKNYIAILDPVTGEAEKTYWDLLRGNQEKYKD 15
           GL+VKNYIAILDPVTGEAEK YW+LLRGNQ K+++
Sbjct: 388 GLVVKNYIAILDPVTGEAEKEYWNLLRGNQGKHRE 422


Top