BLASTX nr result

ID: Cnidium21_contig00017983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017983
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa...   213   1e-53
emb|CBI21082.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002515445.1| chromodomain helicase DNA binding protein, p...   207   7e-52
ref|XP_002309665.1| chromatin remodeling complex subunit [Populu...   206   1e-51
ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type ch...   205   4e-51

>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
           vinifera]
          Length = 1472

 Score =  213 bits (542), Expect = 1e-53
 Identities = 93/113 (82%), Positives = 103/113 (91%)
 Frame = -3

Query: 340 RTDAKVDICQACDGEGDLLSCESCSYAYHPKCLLPPLKAPFPSGWRCPECVSPLNDIDKI 161
           R+DAK D CQAC   G+LLSCE+C+YAYHPKCLLPPLKAP PS WRCP+CVSPLNDIDKI
Sbjct: 46  RSDAKDDSCQACGESGNLLSCETCTYAYHPKCLLPPLKAPLPSNWRCPQCVSPLNDIDKI 105

Query: 160 LDCEMRPTADADSDASKLGSKQVYVKQYLVKWKGLSYLHCTWVPEEDFVKAFK 2
           LDCEMRPT   DSDASKLGSKQ++VKQYLVKWKGLSYLHCTWVPE++F+KAFK
Sbjct: 106 LDCEMRPTVAGDSDASKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFIKAFK 158


>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score =  213 bits (542), Expect = 1e-53
 Identities = 93/113 (82%), Positives = 103/113 (91%)
 Frame = -3

Query: 340 RTDAKVDICQACDGEGDLLSCESCSYAYHPKCLLPPLKAPFPSGWRCPECVSPLNDIDKI 161
           R+DAK D CQAC   G+LLSCE+C+YAYHPKCLLPPLKAP PS WRCP+CVSPLNDIDKI
Sbjct: 46  RSDAKDDSCQACGESGNLLSCETCTYAYHPKCLLPPLKAPLPSNWRCPQCVSPLNDIDKI 105

Query: 160 LDCEMRPTADADSDASKLGSKQVYVKQYLVKWKGLSYLHCTWVPEEDFVKAFK 2
           LDCEMRPT   DSDASKLGSKQ++VKQYLVKWKGLSYLHCTWVPE++F+KAFK
Sbjct: 106 LDCEMRPTVAGDSDASKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFIKAFK 158


>ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223545389|gb|EEF46894.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 1470

 Score =  207 bits (527), Expect = 7e-52
 Identities = 89/113 (78%), Positives = 100/113 (88%)
 Frame = -3

Query: 340 RTDAKVDICQACDGEGDLLSCESCSYAYHPKCLLPPLKAPFPSGWRCPECVSPLNDIDKI 161
           R DAK D CQ+C   GDLLSCE+C+Y+YHPKCLLPP+KA  PS WRCPECVSPLNDIDKI
Sbjct: 45  RDDAKADCCQSCGENGDLLSCETCTYSYHPKCLLPPIKATLPSNWRCPECVSPLNDIDKI 104

Query: 160 LDCEMRPTADADSDASKLGSKQVYVKQYLVKWKGLSYLHCTWVPEEDFVKAFK 2
           LDCEMRPT   D+D SKLGSKQ++VKQYLVKWKGLSYLHCTWVPE++F+KAFK
Sbjct: 105 LDCEMRPTVAGDNDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFK 157


>ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222855641|gb|EEE93188.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1340

 Score =  206 bits (525), Expect = 1e-51
 Identities = 91/113 (80%), Positives = 101/113 (89%)
 Frame = -3

Query: 340 RTDAKVDICQACDGEGDLLSCESCSYAYHPKCLLPPLKAPFPSGWRCPECVSPLNDIDKI 161
           R DAK D CQAC    +LL+CE+C+YAYH KCLLPPLKAPFPS WRCPECVSPLNDIDK+
Sbjct: 45  RDDAKEDSCQACGESENLLNCETCTYAYHSKCLLPPLKAPFPSNWRCPECVSPLNDIDKL 104

Query: 160 LDCEMRPTADADSDASKLGSKQVYVKQYLVKWKGLSYLHCTWVPEEDFVKAFK 2
           LDCEMRPT   DSDASKLGSKQ++VKQYLVKWKGLSYLHCTWVPE++F+KAFK
Sbjct: 105 LDCEMRPTVADDSDASKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFK 157


>ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling
           factor PICKLE-like [Cucumis sativus]
          Length = 1474

 Score =  205 bits (521), Expect = 4e-51
 Identities = 90/114 (78%), Positives = 99/114 (86%)
 Frame = -3

Query: 343 DRTDAKVDICQACDGEGDLLSCESCSYAYHPKCLLPPLKAPFPSGWRCPECVSPLNDIDK 164
           +R D K D CQ C    +LLSCE+C+Y YHPKCL+PPLKAP PS WRCPECVSPL+DIDK
Sbjct: 45  ERDDKKEDACQTCGESENLLSCETCTYDYHPKCLIPPLKAPLPSNWRCPECVSPLSDIDK 104

Query: 163 ILDCEMRPTADADSDASKLGSKQVYVKQYLVKWKGLSYLHCTWVPEEDFVKAFK 2
           ILDCEMRPT   DSDASKLGSKQV+VKQYLVKWKGLSYLHCTWVPE+DF+KAFK
Sbjct: 105 ILDCEMRPTLAGDSDASKLGSKQVFVKQYLVKWKGLSYLHCTWVPEKDFIKAFK 158


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