BLASTX nr result

ID: Cnidium21_contig00017967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017967
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   291   4e-76
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   279   1e-72
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-71
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   275   3e-71
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   270   6e-70

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  291 bits (744), Expect = 4e-76
 Identities = 156/288 (54%), Positives = 185/288 (64%), Gaps = 13/288 (4%)
 Frame = +2

Query: 134 MAYQPIRG------AGSGLQFLNNPFGDTTYTKVFVGGLAWETKSETLHTYFHKFGEILE 295
           MAYQPI G      + SG QFLN+PFGDTTYTKVFVGGLAWET+SET+  YF +FGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 296 AVVITDKHTARSKGYGFVTFSDPEAAKRACVDPNPIIDGRKANCNLASLGRPQPSLPYVR 475
           AVVITDK+T RSKGYGFVTF DPE+A+RAC+DP PIIDGR+ANCNLASLGRP+PS+ Y R
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGR 120

Query: 476 LRPALPYFGSPRLNAGSP----SYQQPVXXXXXXXXXXXXXXXXXXXXEYMYPQGFYSSY 643
           LRP  PY GS     GS      YQQPV                    EY+YPQG Y+ Y
Sbjct: 121 LRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPY 180

Query: 644 MGHHQPHMYNVPGAAGTNAFPYGQLGQ--PGTLGYRPIQGFVMPGGPGPHLMQYGRPNVS 817
            G     +Y VPG   T  +PYGQLGQ  P + GY  +QG+ M   PG   MQ+G  +V+
Sbjct: 181 PGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAM---PGHQFMQFGGSSVN 237

Query: 818 GAMSETIPTVQAPYFTGM-SPSLGQARSINSVNLPQVPRNSGSD*MVG 958
              +  IPT+QAPY TG+ +P   Q + I   + PQ  + SG D   G
Sbjct: 238 AISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTTG 285


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  279 bits (714), Expect = 1e-72
 Identities = 153/290 (52%), Positives = 187/290 (64%), Gaps = 15/290 (5%)
 Frame = +2

Query: 134 MAYQPIRG------AGSGLQFLNNPFGDTTYTKVFVGGLAWETKSETLHTYFHKFGEILE 295
           MAYQ + G      + SG Q++N+PFGDTTYTKVFVGGLAWET+SET+  YF +FG+ILE
Sbjct: 1   MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 296 AVVITDKHTARSKGYGFVTFSDPEAAKRACVDPNPIIDGRKANCNLASLGRPQPSLPYV- 472
           AVVITDK+T RSKGYGFVTF +PEAA+RAC DP P+IDGR+ANCNLASLGRP+P  PYV 
Sbjct: 61  AVVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQPYVG 120

Query: 473 RLRPALPYFGS---PR-LNAGSPSYQQPVXXXXXXXXXXXXXXXXXXXXEYMYPQGFYSS 640
           RLRPA PY  S   PR   AGS  YQQPV                    EY+Y QG Y+ 
Sbjct: 121 RLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYNP 180

Query: 641 Y-MGHHQPHMYNVPGAAGTNAFPYGQLGQ--PGTLGYRPIQGFVMPGGPGPHLMQYGRPN 811
           Y  G     +Y VPG   T  +PYGQ GQ  PG  GY  +QG+ +   PG H+MQ+G P 
Sbjct: 181 YAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAV---PGHHIMQFGGPG 237

Query: 812 VSGAMSETIPTVQAPYFTGMSPSL-GQARSINSVNLPQVPRNSGSD*MVG 958
           V+   +  +PT+QAPY TG++ ++  Q + I     PQ   +SGSD   G
Sbjct: 238 VNAMTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQTTG 287


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  276 bits (705), Expect = 1e-71
 Identities = 149/289 (51%), Positives = 187/289 (64%), Gaps = 14/289 (4%)
 Frame = +2

Query: 134 MAYQPIRG------AGSGLQFLNNPFGDTTYTKVFVGGLAWETKSETLHTYFHKFGEILE 295
           MAYQ I G      + SG Q++N+PFGDTTYTKVFVGGLAWET+SET+  YF +FG+ILE
Sbjct: 1   MAYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 296 AVVITDKHTARSKGYGFVTFSDPEAAKRACVDPNPIIDGRKANCNLASLGRPQPSLPYVR 475
           AVVITDK+T RSKGYGFVTF +P+AA+RAC DP PIIDGR+ANCNLASLGRP+P LPY R
Sbjct: 61  AVVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLPYGR 120

Query: 476 LRPALPYFGS---PR-LNAGSPSYQQPVXXXXXXXXXXXXXXXXXXXXEYMYPQGFYSSY 643
            RPA PY  S   PR    GS  YQQPV                    EY+Y QG Y+ Y
Sbjct: 121 PRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYNPY 180

Query: 644 -MGHHQPHMYNVPGAAGTNAFPYGQLGQ--PGTLGYRPIQGFVMPGGPGPHLMQYGRPNV 814
             GH    +Y VPG   +  +PYGQL Q  PG  GY  + G+ +   PG  ++Q+G P+V
Sbjct: 181 ATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAV---PGHQIVQFGGPSV 237

Query: 815 SGAMSETIPTVQAPYFTGMSPSL-GQARSINSVNLPQVPRNSGSD*MVG 958
           +   + ++PT+QAPY TG++ ++  Q++ I     PQ  + SGSD   G
Sbjct: 238 NAITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQTTG 286


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  275 bits (702), Expect = 3e-71
 Identities = 151/289 (52%), Positives = 184/289 (63%), Gaps = 14/289 (4%)
 Frame = +2

Query: 134 MAYQPIRG------AGSGLQFLNNPFGDTTYTKVFVGGLAWETKSETLHTYFHKFGEILE 295
           MAYQ ++G      + SG Q LN+PFGDTTYTKVFVGGLAWET+SET+  YF +FGEILE
Sbjct: 1   MAYQAMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 296 AVVITDKHTARSKGYGFVTFSDPEAAKRACVDPNPIIDGRKANCNLASLGRPQPSLPYVR 475
           AVVITDK+T RSKGYGFVTF DPEAA+RAC DP+P+IDGR+ANCNLASLGRP+P LPY R
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYGR 120

Query: 476 LRPALPYFGS--PRLNA--GSPSYQQPVXXXXXXXXXXXXXXXXXXXXEYMYPQGFYSSY 643
           +RPA PY GS  P   A  G   YQQPV                    EY+YPQ  Y+ Y
Sbjct: 121 IRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYNPY 180

Query: 644 MGHHQPHMYNVPGAAGTNA-FPYGQLGQPGTL--GYRPIQGFVMPGGPGPHLMQYGRPNV 814
           MG     +Y VPGA  T   +PYGQ+GQ  T   GY  +QG+ +   PG  ++ YG  NV
Sbjct: 181 MGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTV---PGHQIVPYGGSNV 237

Query: 815 SGAMSETIPTVQAPYFTGM-SPSLGQARSINSVNLPQVPRNSGSD*MVG 958
           +   +  +P +QA Y +G+ +P  GQ + I     PQ  + SG D   G
Sbjct: 238 NAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTAG 286


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score =  270 bits (691), Expect = 6e-70
 Identities = 151/296 (51%), Positives = 182/296 (61%), Gaps = 21/296 (7%)
 Frame = +2

Query: 134 MAYQPIR------GAGSGLQFLNNPFGDTTYTKVFVGGLAWETKSETLHTYFHKFGEILE 295
           MAYQ I+       + SG Q LN+PFGDTTYTKVFVGGLAWET+SET+  YF +FGEILE
Sbjct: 1   MAYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 296 AVVITDKHTARSKGYGFVTFSDPEAAKRACVDPNPIIDGRKANCNLASLGRPQPSLPY-- 469
           AVVITDK+T RSKGYGFVTF DPEAA+RAC DP P+IDGR+ANCNLASLGRP+P LPY  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGI 120

Query: 470 -----VRLRPALPYFGS--PRLNA---GSPSYQQPVXXXXXXXXXXXXXXXXXXXXEYMY 619
                 R+RPA PY GS  P   A   G    QQPV                    EY+Y
Sbjct: 121 VLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIY 180

Query: 620 PQGFYSSYMGHHQPHMYNVPGAAGTNAFPYGQLGQ--PGTLGYRPIQGFVMPGGPGPHLM 793
           PQ  Y+ YMG     +Y VPGA  T  +PYGQ+GQ  P   GY  IQG+ +   PG  ++
Sbjct: 181 PQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTV---PGHQIV 237

Query: 794 QYGRPNVSGAMSETIPTVQAPYFTGM-SPSLGQARSINSVNLPQVPRNSGSD*MVG 958
            YG  NV+   +  +P +QA Y +G+ +P  GQ + I   + PQ  + SG D   G
Sbjct: 238 PYGGSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTAG 293


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