BLASTX nr result

ID: Cnidium21_contig00017949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017949
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lo...    79   3e-13
ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis...    78   8e-13
gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lo...    77   1e-12
ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [...    76   3e-12
ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [...    74   9e-12

>gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
          Length = 275

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/102 (50%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -3

Query: 337 MSNNPGDGGAGDDFLEQILGFPVYAGADSNLAGN-EVPMMLQLNSXXXXXXXXXXXGFEF 161
           M+N+P D  A DDFLEQILG P +A AD   A +   PMMLQLNS              +
Sbjct: 1   MANHPSDAPAADDFLEQILGLPNFASADGTDASSLHAPMMLQLNSGDLAAGGAGFHSPVY 60

Query: 160 PLGLSLEQGKGSNEYFKMDHEDVEASGSGKRFRSDDVVVDSR 35
            LGLSL+QGKG   + K D    +ASGSG RFR +DVVV +R
Sbjct: 61  QLGLSLDQGKGGG-FLKPD----DASGSGNRFR-EDVVVGAR 96


>ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
           gi|297735488|emb|CBI17928.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 56/117 (47%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -3

Query: 337 MSNNPGDGGAGDDFLEQILGFPVYAGADSNLAGNEV----PMMLQLNS-XXXXXXXXXXX 173
           M++NP +  A DDFLEQILG P Y  AD NLA N+V    PM+LQL S            
Sbjct: 1   MASNPSEAPA-DDFLEQILGIPTYPAADPNLAANDVNLAAPMVLQLGSGEGSGHIAGGYQ 59

Query: 172 GFEFPLGLSLEQGKGSNEYFKMDHEDVEASGSGKRFRSDDVVVDSRGAPVIRTGFQG 2
           G  FPLGL LEQGK S  + K +    +ASGSGKRFR +  V+D R A  ++  F G
Sbjct: 60  GTMFPLGLRLEQGKSS--FLKPE----DASGSGKRFREE--VIDGR-ASTVKNAFHG 107


>gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
          Length = 297

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 54/114 (47%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
 Frame = -3

Query: 337 MSNNPGDGGAGDDFLEQILGFPVYAGADSNLAGNEV------PMMLQLNSXXXXXXXXXX 176
           M+NNP D  A DDFLEQILG P +   DS L G ++      PMMLQLNS          
Sbjct: 1   MANNPSDAPAADDFLEQILGLPPFGSGDSGLVGPDIGLAGTAPMMLQLNSADHGNHHHLA 60

Query: 175 XGFEF-----PLGLSLEQGK--GSNEYFKMDHEDVEASGSGKRFRSDDVVVDSR 35
            G  F      LGLSL+QGK  G   + K +    +ASGSGKRFR D  VVD R
Sbjct: 61  AGGPFHAPVYQLGLSLDQGKVVGGGGFLKPE----DASGSGKRFRDD--VVDGR 108


>ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
          Length = 292

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
 Frame = -3

Query: 337 MSNNPGDGGAGDDFLEQILGFPVYAGADSNLAGNEV---------PMMLQLNSXXXXXXX 185
           M+NNP D  A DDFLEQILG P +A ADS L+  +V         PMMLQL+S       
Sbjct: 1   MANNPSDAPA-DDFLEQILGLPTFASADSGLSAADVGLAGAATQSPMMLQLSSADANAHL 59

Query: 184 XXXXGFE--FPLGLSLEQGKGSNEYFKMDHEDVEASGSGKRFRSDDVVVDSRGAPV 23
                    + LGLSLEQGKG   + K D    EAS SGKRFR D  VVD+R   V
Sbjct: 60  AGASFHAPVYQLGLSLEQGKG--RFMKPD----EASASGKRFRDD--VVDNRAKHV 107


>ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
          Length = 292

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 55/116 (47%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
 Frame = -3

Query: 337 MSNNPGDGGAGDDFLEQILGFPVYAGADSNL---------AGNEVPMMLQLNSXXXXXXX 185
           M+NNP D  A DDFLEQILG P +A ADS L         A  + PMMLQLNS       
Sbjct: 1   MANNPSDAPA-DDFLEQILGLPNFASADSGLSAADVGLAGAATQAPMMLQLNSADANAHL 59

Query: 184 XXXXGFE--FPLGLSLEQGKGSNEYFKMDHEDVEASGSGKRFRSDDVVVDSRGAPV 23
                    + LGLSL+QGKG   + K +    EAS SGKRFR D  VVD+R   V
Sbjct: 60  AGAAFHAPVYQLGLSLDQGKGG--FMKPE----EASASGKRFRDD--VVDNRAKNV 107


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