BLASTX nr result

ID: Cnidium21_contig00017915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017915
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]                176   4e-42
emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]         176   4e-42
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    171   2e-40
emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]        166   3e-39
ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g...   164   2e-38

>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
          Length = 642

 Score =  176 bits (446), Expect = 4e-42
 Identities = 96/195 (49%), Positives = 124/195 (63%)
 Frame = +3

Query: 3   VYGTKPRHLACQPRAHTNLHSLEEYLTARQLQWDRLKELLESAQLKMKQYADAKRSFRSF 182
           +YG  P H     +    +  L ++L  R+L  + +++ L  AQ +MK +AD KRSFRSF
Sbjct: 361 LYGHSPSHFGIGSQ-DCAIPDLAQWLKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSF 419

Query: 183 QPGEWVFLKLQPYRQVSVAIRKNLKLAAKYFGPYEILDKIGTVAYKLALPPTSRIHSVFH 362
           + G+WV+LKLQPY Q SVA+R N KLA KYFGPY++  KIGTVAY+L LP ++ IH VFH
Sbjct: 420 EVGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFH 479

Query: 363 VSQLKKAVGQHKVFQHLPPVNDQGVFDLVPLRQLDSRQILRNTKVVYQLLIQWKGCSVEE 542
           VSQLK A+G     QH  P +   +   VPLR LD R   R    V Q+LIQW     E+
Sbjct: 480 VSQLKSAIGFTGPVQHQLPASTAPL--QVPLRILDRRLTKRGNSAVAQVLIQWSASVPED 537

Query: 543 ATWEDEDLLKSNFPS 587
           ATWED D L+S FP+
Sbjct: 538 ATWEDLDDLRSRFPA 552


>emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]
          Length = 753

 Score =  176 bits (446), Expect = 4e-42
 Identities = 96/195 (49%), Positives = 124/195 (63%)
 Frame = +3

Query: 3   VYGTKPRHLACQPRAHTNLHSLEEYLTARQLQWDRLKELLESAQLKMKQYADAKRSFRSF 182
           +YG  P H     +    +  L ++L  R+L  + +++ L  AQ +MK +AD KRSFRSF
Sbjct: 249 LYGHSPSHFGIGSQ-DCAIPDLAQWLKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSF 307

Query: 183 QPGEWVFLKLQPYRQVSVAIRKNLKLAAKYFGPYEILDKIGTVAYKLALPPTSRIHSVFH 362
           + G+WV+LKLQPY Q SVA+R N KLA KYFGPY++  KIGTVAY+L LP ++ IH VFH
Sbjct: 308 EVGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFH 367

Query: 363 VSQLKKAVGQHKVFQHLPPVNDQGVFDLVPLRQLDSRQILRNTKVVYQLLIQWKGCSVEE 542
           VSQLK A+G     QH  P +   +   VPLR LD R   R    V Q+LIQW     E+
Sbjct: 368 VSQLKSAIGFTGPVQHQLPASTAPL--QVPLRILDRRLTKRGNSAVAQVLIQWSASVPED 425

Query: 543 ATWEDEDLLKSNFPS 587
           ATWED D L+S FP+
Sbjct: 426 ATWEDLDDLRSRFPA 440


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  171 bits (432), Expect = 2e-40
 Identities = 95/196 (48%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3    VYGTKPRHLACQPRAHTNLHSLEEYLTARQLQWDRLKELLESAQLKMKQYADAKRSFRSF 182
            +YG  P H   +  A   +  L+ +L+ R L    L++ L  AQ  MK  AD KRSFRSF
Sbjct: 682  LYGYPPSHFGIRADACV-ISDLDSWLSERHLMTQLLRQHLNRAQQVMKTQADKKRSFRSF 740

Query: 183  QPGEWVFLKLQPYRQVSVAIRKNLKLAAKYFGPYEILDKIGTVAYKLALPPTSRIHSVFH 362
            Q G+WVFLKLQPY Q SVA R N KL+ +YFGPY+IL K+G+VAYKL LP  S +H VFH
Sbjct: 741  QVGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSKVGSVAYKLQLPADSMVHPVFH 800

Query: 363  VSQLKKAVG-QHKVFQHLPPVNDQGVFDLVPLRQLDSRQILRNTKVVYQLLIQWKGCSVE 539
            VSQLK     +H +   LP + D   +   P++ LD+R   +  KVV Q+L+ W      
Sbjct: 801  VSQLKGTQNFKHSIQSQLPNITDHIQY---PVQILDTRIQKKGNKVVRQILVCWSNLPAV 857

Query: 540  EATWEDEDLLKSNFPS 587
            EATWEDE+ LK  FPS
Sbjct: 858  EATWEDEEELKQRFPS 873


>emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
          Length = 1817

 Score =  166 bits (421), Expect = 3e-39
 Identities = 98/199 (49%), Positives = 124/199 (62%), Gaps = 4/199 (2%)
 Frame = +3

Query: 3    VYGTKPRH--LACQPRAHTNLHSLEEYLTARQLQWDRLKELLESAQLKMKQYADAKRSFR 176
            +YG  P H  ++ Q  A  +LH    +L  RQL    +++ L  AQ +MK +AD KRSFR
Sbjct: 1413 LYGHSPCHFGISLQDCAIPDLHV---WLKERQLMQKLVQQHLHRAQQQMKHFADKKRSFR 1469

Query: 177  SFQPGEWVFLKLQPYRQVSVAIRKNLKLAAKYFGPYEILDKIGTVAYKLALPPTSRIHSV 356
            +F  G+WV+LKLQPY Q SVA+R N KLA KYFGP++I  +IGTVAYKL LPPTS IH V
Sbjct: 1470 TFAIGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPFQITAQIGTVAYKLQLPPTSSIHPV 1529

Query: 357  FHVSQLKKAVG-QHKVFQHLPPVNDQGVFDL-VPLRQLDSRQILRNTKVVYQLLIQWKGC 530
            FHVSQLK A G    V  HLP      +  L VP R LD R   +    + Q+L+QW   
Sbjct: 1530 FHVSQLKSATGFTGHVQSHLP----SSISALQVPWRILDRRLAKKGNSTISQVLVQWSES 1585

Query: 531  SVEEATWEDEDLLKSNFPS 587
              E+ATWED + L + FP+
Sbjct: 1586 PPEDATWEDYEELHARFPA 1604


>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
           gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
           [Oryza sativa Japonica Group]
          Length = 399

 Score =  164 bits (415), Expect = 2e-38
 Identities = 91/195 (46%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
 Frame = +3

Query: 3   VYGTKPRHLACQPRAHTNLHSLEEYLTARQLQWDRLKELLESAQLKMKQYADAKRSFRSF 182
           +YG  PR+          +  L+ +L  R+L    +++ L  AQ  MK  AD KRSFRSF
Sbjct: 143 LYGHPPRYFGIHSE-DCAIPELQVWLKERRLMHSLIQQHLNRAQQHMKNMADKKRSFRSF 201

Query: 183 QPGEWVFLKLQPYRQVSVAIRKNLKLAAKYFGPYEILDKIGTVAYKLALPPTSRIHSVFH 362
           + G+WV++KLQPY Q SVA R N KLA +YFGP++++ K G+VAYKL LP TS IH VFH
Sbjct: 202 ELGDWVYIKLQPYVQSSVAARANHKLAFRYFGPFQVIQKFGSVAYKLQLPTTSSIHPVFH 261

Query: 363 VSQLKKAVG-QHKVFQHLPPVNDQGVFDLVPLRQLDSRQILRNTKVVYQLLIQWKGCSVE 539
           VSQLK A G Q  +   LP  +D   +   P+  LD+R I +    V Q+LIQW   +VE
Sbjct: 262 VSQLKAAKGFQGALHSTLPSSDDAFQY---PIMLLDNRLIKKGNTTVSQVLIQWSDTAVE 318

Query: 540 EATWEDEDLLKSNFP 584
           +ATWED + L++ FP
Sbjct: 319 DATWEDLEDLRARFP 333


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