BLASTX nr result

ID: Cnidium21_contig00017912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017912
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537562.1| PREDICTED: putative uncharacterized protein ...   245   5e-63
ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|2...   245   7e-63
ref|XP_002522599.1| ATP-dependent RNA helicase, putative [Ricinu...   244   2e-62
ref|XP_004137287.1| PREDICTED: putative uncharacterized protein ...   241   8e-62
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...   239   3e-61

>ref|XP_003537562.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1736

 Score =  245 bits (626), Expect = 5e-63
 Identities = 106/157 (67%), Positives = 125/157 (79%)
 Frame = -1

Query: 700  IADLKSLLSNEKLDELFRXXXXXXXXXXXGIYKFCPSPDCPSIYRAVVDPDCDGTPFFCG 521
            + DL+SLL  +KL++LFR           G Y+FCPSPDCPSIYR V DP+  G PF CG
Sbjct: 1581 LTDLRSLLFGDKLEDLFRASLGAFVATSGGAYRFCPSPDCPSIYR-VADPESAGEPFVCG 1639

Query: 520  ACSVETCTKCHLEYHPYLSCERYKEFKEDPDSSLKEWCKGKEHVKSCPLCGFTIEKVEGC 341
            +C  ETCT+CHLEYHPYLSCERY+EFKEDPDSSLKEWC+GKE VK C  CG+ IEKV+GC
Sbjct: 1640 SCYSETCTRCHLEYHPYLSCERYQEFKEDPDSSLKEWCRGKEQVKCCSACGYVIEKVDGC 1699

Query: 340  NHVACRCGRHICWACLESFSSSDDCYNHLRSIHEAII 230
            NHV C+CG+H+CW CLE FS+S+DCYNHLR+IH AII
Sbjct: 1700 NHVECKCGKHVCWVCLEFFSTSNDCYNHLRTIHLAII 1736


>ref|XP_002307067.1| predicted protein [Populus trichocarpa] gi|222856516|gb|EEE94063.1|
            predicted protein [Populus trichocarpa]
          Length = 1743

 Score =  245 bits (625), Expect = 7e-63
 Identities = 104/156 (66%), Positives = 126/156 (80%)
 Frame = -1

Query: 700  IADLKSLLSNEKLDELFRXXXXXXXXXXXGIYKFCPSPDCPSIYRAVVDPDCDGTPFFCG 521
            + DL+SLLS++KL+ELFR           G Y+FCPSPDCPS+YR V DP   G PF CG
Sbjct: 1588 LTDLRSLLSSDKLEELFRASLGSFVASSGGTYRFCPSPDCPSVYR-VADPVTGGDPFVCG 1646

Query: 520  ACSVETCTKCHLEYHPYLSCERYKEFKEDPDSSLKEWCKGKEHVKSCPLCGFTIEKVEGC 341
            AC  ETCT+CHL+YHPYLSC++Y EFKEDPD SLK+WCKGKE+VKSCP+CG+TIEK EGC
Sbjct: 1647 ACFAETCTRCHLDYHPYLSCKKYMEFKEDPDLSLKDWCKGKENVKSCPVCGYTIEKGEGC 1706

Query: 340  NHVACRCGRHICWACLESFSSSDDCYNHLRSIHEAI 233
            NHV C+CG H+CW CLES+++S+DCYNHLRS+H  I
Sbjct: 1707 NHVECKCGGHVCWVCLESYNNSEDCYNHLRSMHGGI 1742


>ref|XP_002522599.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223538075|gb|EEF39686.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1588

 Score =  244 bits (622), Expect = 2e-62
 Identities = 105/157 (66%), Positives = 124/157 (78%)
 Frame = -1

Query: 700  IADLKSLLSNEKLDELFRXXXXXXXXXXXGIYKFCPSPDCPSIYRAVVDPDCDGTPFFCG 521
            + DLKSLL  +KL++LFR           G Y+FCPSPDCPS+YR V D    G P+ CG
Sbjct: 1433 LTDLKSLLPCDKLEDLFRASVGAFVASSGGTYRFCPSPDCPSVYR-VADTGTFGGPYVCG 1491

Query: 520  ACSVETCTKCHLEYHPYLSCERYKEFKEDPDSSLKEWCKGKEHVKSCPLCGFTIEKVEGC 341
            AC  ETCT+CHLEYHPY+SCERYKEFK+DPD SLK+WC+GK+HVKSCP+CG+ IEKV+GC
Sbjct: 1492 ACYTETCTRCHLEYHPYVSCERYKEFKDDPDLSLKDWCRGKDHVKSCPVCGYIIEKVDGC 1551

Query: 340  NHVACRCGRHICWACLESFSSSDDCYNHLRSIHEAII 230
            NH+ CRCG+HICW C E FSSSDDCY HLR+IH AII
Sbjct: 1552 NHIECRCGKHICWVCSEFFSSSDDCYGHLRTIHLAII 1588


>ref|XP_004137287.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Cucumis sativus]
          Length = 1735

 Score =  241 bits (616), Expect = 8e-62
 Identities = 105/157 (66%), Positives = 124/157 (78%)
 Frame = -1

Query: 700  IADLKSLLSNEKLDELFRXXXXXXXXXXXGIYKFCPSPDCPSIYRAVVDPDCDGTPFFCG 521
            +AD+++LLS+EKL+ELFR           G Y+FCPSPDCPS+YR V  PD  G PF CG
Sbjct: 1580 LADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSPDCPSVYR-VARPDMPGEPFVCG 1638

Query: 520  ACSVETCTKCHLEYHPYLSCERYKEFKEDPDSSLKEWCKGKEHVKSCPLCGFTIEKVEGC 341
            AC  ETC +CHLEYHP+LSCE+Y+ FKEDPDSSLKEW KGKE+VK+CP+CG+TIEK EGC
Sbjct: 1639 ACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRKGKENVKNCPVCGYTIEKTEGC 1698

Query: 340  NHVACRCGRHICWACLESFSSSDDCYNHLRSIHEAII 230
            NHV CRCGRHICW CLE F SSD+CY HL S+H  I+
Sbjct: 1699 NHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1735


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
            [Medicago truncatula] gi|355490965|gb|AES72168.1|
            Pre-mRNA splicing factor ATP-dependent RNA helicase-like
            protein [Medicago truncatula]
          Length = 1718

 Score =  239 bits (611), Expect = 3e-61
 Identities = 104/156 (66%), Positives = 121/156 (77%)
 Frame = -1

Query: 700  IADLKSLLSNEKLDELFRXXXXXXXXXXXGIYKFCPSPDCPSIYRAVVDPDCDGTPFFCG 521
            + D ++LLSN+KLDELFR           G Y+FCPSPDCPS+YR V D D    PF CG
Sbjct: 1564 LTDFRTLLSNDKLDELFRASLGAFVASSSGTYRFCPSPDCPSVYR-VADSDTASEPFVCG 1622

Query: 520  ACSVETCTKCHLEYHPYLSCERYKEFKEDPDSSLKEWCKGKEHVKSCPLCGFTIEKVEGC 341
            AC  ETCTKCHLEYHPYLSCERY+E K+DPDSSLKEWCKGKE VKSC  CG  IEK++GC
Sbjct: 1623 ACYSETCTKCHLEYHPYLSCERYRELKDDPDSSLKEWCKGKEQVKSCFACGQIIEKIDGC 1682

Query: 340  NHVACRCGRHICWACLESFSSSDDCYNHLRSIHEAI 233
            NHV C+CG+H+CW CLE F+SSD+CY+HLR+IH  I
Sbjct: 1683 NHVECKCGKHVCWVCLEIFTSSDECYDHLRTIHMTI 1718


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