BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017910
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis prot...   345   2e-92
ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm...   332   1e-88
ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 ...   323   4e-86
ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 ...   322   2e-85
gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]              313   4e-83

>ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
            [Vitis vinifera]
          Length = 302

 Score =  345 bits (884), Expect = 2e-92
 Identities = 189/302 (62%), Positives = 207/302 (68%), Gaps = 16/302 (5%)
 Frame = -1

Query: 1225 MGH-KPRRFKTSHSHRSEGQSSRSHHISGDADSLXXXXXXXXXXXXP-----------KI 1082
            MGH K RRFK   SHR  GQSSR      + DSL                        K+
Sbjct: 1    MGHNKARRFKGHQSHR--GQSSRFQEPLREYDSLPTDQVAMGFNFCAVAAEEEELSVPKV 58

Query: 1081 QLAMWDFGQCDSKKCTGRKLSRFKFLKE----LRVGNSFGGIVLSPAGTQCVSKEDQSLM 914
            QLAMWDFGQCD+K+CTGRKLSRF  LKE    LRV + FGGI LSP G QCVSKED  L+
Sbjct: 59   QLAMWDFGQCDAKRCTGRKLSRFGLLKESIRLLRVTSGFGGIALSPVGNQCVSKEDYILI 118

Query: 913  NRKGLAVVDCSWARLDDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSAALII 734
             RKGLAVVDCSWARL DVPFTKLRC APRLLPWLVAANP+NYGRPC+LSCVEALSAAL I
Sbjct: 119  KRKGLAVVDCSWARLSDVPFTKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALSAALFI 178

Query: 733  CGEKETAELLLSKFKWGHAFLSLNRALLKSYSECESSADMIIVQNAWLSQQKPRVAKGLP 554
            CGE+ETA LLL KFKWGHAFLSLNR LLK+YS+CE+ A++I VQNAWLSQQ+ +V K LP
Sbjct: 179  CGEEETANLLLGKFKWGHAFLSLNRELLKAYSKCENGAEIISVQNAWLSQQRLQVQKALP 238

Query: 553  DVATGADVXXXXXXXXXXXXXGLPPLEKNLNHLNXXXXXXXXXXXXENGLPPLEKNLNRV 374
            D   G                GLPPLEKNLNHLN            E+GLPPLEKNLN +
Sbjct: 239  DDEAGVSSQNDDEGSCDDSEDGLPPLEKNLNHLN------LEESDSEDGLPPLEKNLNHL 292

Query: 373  NL 368
            NL
Sbjct: 293  NL 294


>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
            gi|223531580|gb|EEF33409.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 285

 Score =  332 bits (851), Expect = 1e-88
 Identities = 174/263 (66%), Positives = 201/263 (76%), Gaps = 5/263 (1%)
 Frame = -1

Query: 1225 MGH-KPRRFKTSHSHRSEGQSSRSHHISGDADSLXXXXXXXXXXXXP-KIQLAMWDFGQC 1052
            MGH KPRR K+ HS+R  GQSSR++ +  + +SL              ++QLAMWDFGQC
Sbjct: 1    MGHNKPRRSKSHHSNR--GQSSRTNLLEREDESLPSDQVPEEDTNSTPRVQLAMWDFGQC 58

Query: 1051 DSKKCTGRKLSRFKFLKELRVGNSFGGIVLSPAGTQCVSKEDQSLMNRKGLAVVDCSWAR 872
            D+K+CTGRKL RF  LKELRV   FGGIVLSP G+QCVSK+D SL+ RKGLAVVDCSWAR
Sbjct: 59   DAKRCTGRKLGRFGLLKELRVNCGFGGIVLSPVGSQCVSKQDHSLIKRKGLAVVDCSWAR 118

Query: 871  LDDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSAALIICGEKETAELLLSKF 692
            L+DVPF KLRC APRLLPWLVAANP+NYGRPC+LSCVEALSAALIICGE+ETA+LLL+KF
Sbjct: 119  LNDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETADLLLNKF 178

Query: 691  KWGHAFLSLNRALLKSYSECESSADMIIVQNAWLSQQKPRVAKGLPD---VATGADVXXX 521
            KWGHAFLSLNR LLK+YSECE+SAD+I VQN WLSQQ  +V K +PD     T  D    
Sbjct: 179  KWGHAFLSLNRELLKAYSECENSADIISVQNGWLSQQS-KVPKAVPDSEEAETSKD---- 233

Query: 520  XXXXXXXXXXGLPPLEKNLNHLN 452
                      GLPPLE+N+NHLN
Sbjct: 234  -EGSCSDSEDGLPPLERNMNHLN 255


>ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis sativus]
          Length = 265

 Score =  323 bits (829), Expect = 4e-86
 Identities = 166/257 (64%), Positives = 190/257 (73%), Gaps = 2/257 (0%)
 Frame = -1

Query: 1219 HKPRRFKTSHSHRSEGQSSRSHHISGDADSLXXXXXXXXXXXXPKIQLAMWDFGQCDSKK 1040
            +K RRFK  H  R  GQS+R H   G+ + L            P IQLAMWDFGQCD+K+
Sbjct: 4    NKTRRFKNHHPRR--GQSTRGHKFIGEDECLPVDPANEEEPTRPNIQLAMWDFGQCDAKR 61

Query: 1039 CTGRKLSRFKFLKELRVGNSFGGIVLSPAGTQCVSKEDQSLMNRKGLAVVDCSWARLDDV 860
            CTGRKL+RF  LKELRV + FGGIVLSP G  CVSKED SL+ +KGLAVVDCSWARL DV
Sbjct: 62   CTGRKLARFGLLKELRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWARLGDV 121

Query: 859  PFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSAALIICGEKETAELLLSKFKWGH 680
            PF KLRC APRLLPWLVAANP+NYGRPC+LSCVEAL+AALIICGE ETA+LLL KFKWGH
Sbjct: 122  PFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGETADLLLGKFKWGH 181

Query: 679  AFLSLNRALLKSYSECESSADMIIVQNAWLSQQK--PRVAKGLPDVATGADVXXXXXXXX 506
            AFLS+NR LLK YS CE+SAD+I VQNAWLSQQ+  P+    + D ++ ++         
Sbjct: 182  AFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEDKSSVSE----HDEGS 237

Query: 505  XXXXXGLPPLEKNLNHL 455
                 GLPPLEKNLNHL
Sbjct: 238  DDSEDGLPPLEKNLNHL 254


>ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis sativus]
          Length = 265

 Score =  322 bits (824), Expect = 2e-85
 Identities = 165/257 (64%), Positives = 189/257 (73%), Gaps = 2/257 (0%)
 Frame = -1

Query: 1219 HKPRRFKTSHSHRSEGQSSRSHHISGDADSLXXXXXXXXXXXXPKIQLAMWDFGQCDSKK 1040
            +K RRFK  H  R  GQS+R H   G+ + L            P I LAMWDFGQCD+K+
Sbjct: 4    NKTRRFKNHHPRR--GQSTRGHKFIGEDECLPVDPANEEEPTRPNIHLAMWDFGQCDAKR 61

Query: 1039 CTGRKLSRFKFLKELRVGNSFGGIVLSPAGTQCVSKEDQSLMNRKGLAVVDCSWARLDDV 860
            CTGRKL+RF  LKELRV + FGGIVLSP G  CVSKED SL+ +KGLAVVDCSWARL DV
Sbjct: 62   CTGRKLARFGLLKELRVNSGFGGIVLSPVGVNCVSKEDHSLLKQKGLAVVDCSWARLGDV 121

Query: 859  PFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSAALIICGEKETAELLLSKFKWGH 680
            PF KLRC APRLLPWLVAANP+NYGRPC+LSCVEAL+AALIICGE ETA+LLL KFKWGH
Sbjct: 122  PFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALAAALIICGEGETADLLLGKFKWGH 181

Query: 679  AFLSLNRALLKSYSECESSADMIIVQNAWLSQQK--PRVAKGLPDVATGADVXXXXXXXX 506
            AFLS+NR LLK YS CE+SAD+I VQNAWLSQQ+  P+    + D ++ ++         
Sbjct: 182  AFLSVNRELLKQYSACENSADIISVQNAWLSQQRQVPKEPHNVEDKSSVSE----HDEGS 237

Query: 505  XXXXXGLPPLEKNLNHL 455
                 GLPPLEKNLNHL
Sbjct: 238  DDSEDGLPPLEKNLNHL 254


>gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]
          Length = 449

 Score =  313 bits (803), Expect = 4e-83
 Identities = 166/292 (56%), Positives = 203/292 (69%), Gaps = 6/292 (2%)
 Frame = -1

Query: 1225 MGH-KPRRFKTSHSHRSEGQSSRSHHISGDADSLXXXXXXXXXXXXPKIQLAMWDFGQCD 1049
            MG+ K RR +  +S+   GQ+SR+ +I  + +SL            P +QLAMWDFGQCD
Sbjct: 1    MGYGKHRRSRGGNSN--PGQTSRTENIGREDESLPHDPGSEDEAVVPNVQLAMWDFGQCD 58

Query: 1048 SKKCTGRKLSRFKFLKELRVGNSFGGIVLSPAGTQCVSKEDQSLMNRKGLAVVDCSWARL 869
            +K+CTGRKL+RF  LKELRV   FGG+VLSP G QCVSKED +L+  +GLAVVDCSWARL
Sbjct: 59   AKRCTGRKLARFNLLKELRVNTGFGGVVLSPVGRQCVSKEDYALIKSRGLAVVDCSWARL 118

Query: 868  DDVPFTKLRCVAPRLLPWLVAANPINYGRPCQLSCVEALSAALIICGEKETAELLLSKFK 689
             DVPF KLRC APRLLPWLVAANP+NYGRPC+LSCVEALSAALI+CGE+ETA LLL KFK
Sbjct: 119  TDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSAALILCGEEETANLLLGKFK 178

Query: 688  WGHAFLSLNRALLKSYSECESSADMIIVQNAWLSQQKPRVAKGLP---DVATGADVXXXX 518
            WGHAFLSLN+ +LK YS+CE+SA++I VQN+WL+QQ     +  P    V    D     
Sbjct: 179  WGHAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQISKQPAPLKEHVRKEGD----- 233

Query: 517  XXXXXXXXXGLPPLEKNLNHL--NXXXXXXXXXXXXENGLPPLEKNLNRVNL 368
                     GLPPLE+N+NH+               ++GLPPLE+N+N V L
Sbjct: 234  ESEDDDEDDGLPPLERNMNHVISEDSEEEDEEEEEEDDGLPPLERNMNHVKL 285