BLASTX nr result

ID: Cnidium21_contig00017902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017902
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   115   5e-24
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002318136.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score =  115 bits (287), Expect = 5e-24
 Identities = 62/138 (44%), Positives = 89/138 (64%), Gaps = 4/138 (2%)
 Frame = -3

Query: 410 NPAINEFKPLPDIICKPPTQFHFTYAP-FEVYGFGFDHVSGAYKVVVMKSYWNVHPNDDN 234
           NPA+NEFK LP +   PP+  +F+Y+P ++ YGFG   V+  Y+VVVMK YW      + 
Sbjct: 159 NPAVNEFKFLPPLP-NPPS--NFSYSPQYDAYGFGLHPVTKDYEVVVMKDYWR--EKQEE 213

Query: 233 DSDLNHPVSVLVYSSRTESWRYCGDLSKAYQLEINKCYMYVNECCYWFGSLDY---SSEV 63
                +P+ V VYSS T SWR+ GDLS+ Y L+ NKCY+ +N   +W GS +      +V
Sbjct: 214 RGGCRYPLRVFVYSSSTGSWRHWGDLSRYYYLQNNKCYICMNGVFFWLGSYEIFGDPEKV 273

Query: 62  IISFNMASDSFKEIDVPD 9
           IISF+MA+++ +EI +PD
Sbjct: 274 IISFDMATETCQEIQLPD 291


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
 Frame = -3

Query: 410 NPAINEFKPLPDIICKPPTQFHFTYAP-FEVYGFGFDHVSGAYKVVVMKSYWNVHPNDDN 234
           NPAINE K LP I   P   F F+Y+P +  YGF    V+   +V+VM+ YW        
Sbjct: 162 NPAINELKTLPPI---PNPPFSFSYSPLWNAYGFRLHPVTKDCEVIVMREYWREEEGAWE 218

Query: 233 DSDLNHPVSVLVYSSRTESWRYCGDLSKAYQLEINKCYMYVNECCYWFGSLDY--SSEVI 60
           D    +P+SV VY+  ++SWRY GDLS+ Y L  NKCY+ V    YW GS       EV+
Sbjct: 219 D---RYPLSVFVYTLSSDSWRYWGDLSRYYHLRNNKCYICVEGVFYWLGSYGACGDPEVV 275

Query: 59  ISFNMASDSFKEIDVPDY 6
           I+F+MA++  +EI +PDY
Sbjct: 276 INFDMATNVCQEIQLPDY 293


>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
 Frame = -3

Query: 410 NPAINEFKPLPDIICKPPTQFHFTYAPFEVYGFGFDHVSGAYKVVVMK-SYWNVHPNDDN 234
           NPA  EFK LP+ I +  +     Y   + YGFGFD V+  YKVVV++ SY   +  +  
Sbjct: 118 NPATKEFKLLPEKI-RNKSSLPLYYE--DSYGFGFDPVTNDYKVVVIRESYTREYYLEKF 174

Query: 233 DSDLNHPVSVLVYSSRTESWRYCGDLSKAYQLEINKCYMYVNECCYWFGSLDYSSEVIIS 54
            S L     V+VY+ RT+SWR  G L + Y L  N CY  V+   YW         VI+S
Sbjct: 175 PSSL-----VIVYTLRTDSWRCWGSLDQGYTLLGNYCYTNVDGVYYWQAGHGVHMNVILS 229

Query: 53  FNMASDSFKEIDVPDY 6
           FNMA+D+F+EI  PDY
Sbjct: 230 FNMATDAFQEIQEPDY 245


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
 Frame = -3

Query: 410 NPAINEFKPLPDIICKPPTQFHFTYAPFEVYGFGFDHVSGAYKVVVMK-SYWNVHPNDDN 234
           NPA  EFK LP+ I +  +     Y   + YGFGFD V+  YKVVV++ SY   +  +  
Sbjct: 118 NPATKEFKLLPEKI-RNKSSLPLYYE--DSYGFGFDPVTNDYKVVVIRESYTREYYLEKF 174

Query: 233 DSDLNHPVSVLVYSSRTESWRYCGDLSKAYQLEINKCYMYVNECCYWFGSLDYSSEVIIS 54
            S L     V+VY+ RT+SWR  G L + Y L  N CY  V+   YW         VI+S
Sbjct: 175 PSSL-----VIVYTLRTDSWRCWGSLDQGYTLLGNYCYTNVDGVYYWQAGHGVHMNVILS 229

Query: 53  FNMASDSFKEIDVPDY 6
           FNMA+D+F+EI  PDY
Sbjct: 230 FNMATDAFQEIQEPDY 245


>ref|XP_002318136.1| predicted protein [Populus trichocarpa] gi|222858809|gb|EEE96356.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
 Frame = -3

Query: 410 NPAINEFKPLP-DIICKPPTQFHFTYAPFEVYGFGFDHVSGAYKVVVMK-SYWNVHPNDD 237
           NPA  EFK LP  I  K     ++     +  GFGFD V+  YKVVV++ SY   +  + 
Sbjct: 62  NPATKEFKLLPVKIHNKSSLPLYYD----DSSGFGFDPVTNNYKVVVIRESYTREYYLEK 117

Query: 236 NDSDLNHPVSVLVYSSRTESWRYCGDLSKAYQLEINKCYMYVNECCYWFGSLDYSSEVII 57
             S L     V+VY+ RT+SWR  G L + Y L  N CY  V+   YW     +   VI+
Sbjct: 118 FPSSL-----VIVYTFRTDSWRCWGSLDQGYTLLSNYCYKSVDGVSYWRAGHGHMG-VIL 171

Query: 56  SFNMASDSFKEIDVPDY 6
           SFNMA+D+F+EI  P+Y
Sbjct: 172 SFNMATDAFQEIQGPNY 188


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