BLASTX nr result

ID: Cnidium21_contig00017826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017826
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    62   5e-08
ref|XP_003603209.1| F-box family protein [Medicago truncatula] g...    62   5e-08
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    57   2e-06
ref|XP_003599617.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    57   2e-06
ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   6e-06

>ref|XP_003622276.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497291|gb|AES78494.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 352

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
 Frame = -1

Query: 308 ECLSSKLKTVEIKNFQGINDEFSLVKYLLKHGRVLKTMSIDCSLLPEYAK--IQKKLYKF 135
           ECLSS+LKT  +K ++G+N +F   KY+LK+ +VL+ M+I+ S +    K  I  KL   
Sbjct: 281 ECLSSQLKTCSLKGYRGVNCDFQFAKYILKNAKVLQIMTINASSMDINIKHQILIKLSLC 340

Query: 134 RRGSSTCKLVF 102
           +RGS+TCK+ F
Sbjct: 341 QRGSTTCKISF 351


>ref|XP_003603209.1| F-box family protein [Medicago truncatula]
           gi|355492257|gb|AES73460.1| F-box family protein
           [Medicago truncatula]
          Length = 373

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -1

Query: 308 ECLSSKLKTVEIKNFQGINDEFSLVKYLLKHGRVLKTMSIDCSLLPEYAKIQKKLYKFRR 129
           +CLSS+LKT  ++++ G   EF  VKY+++H  VL+TM+I  + L E  +++ KL    R
Sbjct: 305 DCLSSQLKTCCVRSYIGTEYEFKFVKYIMQHSNVLETMTIQSTCL-ENDRMKLKLSSCTR 363

Query: 128 GSSTCKLVF 102
           GS+TCKL+F
Sbjct: 364 GSTTCKLLF 372


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = -1

Query: 308 ECLSSKLKTVEIKNFQGINDEFSLVKYLLKHGRVLKTMSIDCSLLPEYAK--IQKKLYKF 135
           EC SS+LKT  +  ++G+N +F   KY+LK+ +VL+TM+I+ S +    K  I  KL   
Sbjct: 285 ECFSSQLKTCSLIGYKGMNCDFQFAKYILKNAKVLQTMTINASPVDINIKHQILIKLTLC 344

Query: 134 RRGSSTCKLVF 102
            RGS+TCK+ F
Sbjct: 345 PRGSTTCKISF 355


>ref|XP_003599617.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355488665|gb|AES69868.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 363

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -1

Query: 308 ECLSSKLKTVEIKNFQGINDEFSLVKYLLKHGRVLKTMSIDCSLLPEYAKIQKKLYKFRR 129
           ECLS ++KT  I+ ++G   EF   KY+++H  VL+TM+I  + L +Y ++  KL    R
Sbjct: 298 ECLSRQIKTCCIRGYRGTKYEFEFAKYIMQHSNVLETMTIKSTCLEKY-QMSLKLSSCSR 356

Query: 128 GSSTCKL 108
           GS+ CKL
Sbjct: 357 GSTRCKL 363


>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = -1

Query: 308 ECLSSKLKTVEIKNFQGINDEFSLVKYLLKHGRVLKTMSIDCS-LLPEYAKIQ--KKLYK 138
           ECLSS+LKT  I+ ++G   +    KY++++ +VL+TM+I+ +  L    K Q   KL  
Sbjct: 319 ECLSSQLKTCHIRVYKGTKYDLEFTKYIMENSKVLETMTINSTRSLDMNVKYQLLMKLSS 378

Query: 137 FRRGSSTCKLVF 102
           + RGS+TCKL+F
Sbjct: 379 YTRGSTTCKLLF 390


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