BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017813
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...   273   6e-71
ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...   256   6e-66
ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...   251   3e-64
ref|NP_565644.1| Coiled-coil domain-containing protein 55 (DUF20...   250   6e-64
ref|XP_002880900.1| hypothetical protein ARALYDRAFT_481627 [Arab...   244   2e-62

>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
           vinifera] gi|147866225|emb|CAN79937.1| hypothetical
           protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score =  273 bits (698), Expect = 6e-71
 Identities = 156/315 (49%), Positives = 200/315 (63%), Gaps = 9/315 (2%)
 Frame = +3

Query: 12  MSKYGLQIRVKPSSSSQHNRLSATRPPRPPPSVFLXXXXXXXXXXISRQASKNKSNKDYE 191
           M KYGLQ+RV PS   +      TRPP PPP  F           ISRQASKNK+ KD E
Sbjct: 1   MKKYGLQLRVPPSQQKKQ----PTRPPLPPPLGFCDENEDDIEREISRQASKNKTLKDIE 56

Query: 192 ELHKKALEEDPKAFDYDEVFDDMKQAAVLKTTQDKQKRESKYIKALMDKSKAREREQEIV 371
           E HKKALEEDP AFDYD+V+++MK+  +    QD+Q+R+ KYI+ L++K+K RERE EI+
Sbjct: 57  EQHKKALEEDPTAFDYDDVYEEMKEKTIRPLAQDRQERKPKYIQKLIEKAKQREREHEII 116

Query: 372 YERKLAKERSKDEHQFQDKEKFVTGAYKRKLAEQAKWVXXXXXXXXXXQKEDITKKGDMS 551
           YE+KL KERSKD+  + DK+KF+TGAYK+KLAEQAKW+          +K+D+TKK D+S
Sbjct: 117 YEKKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLS 176

Query: 552 DFYFNLSKNVAFGAGEAEPRXXXXXXXXXXXXXXXXXXXXXXXXXXQPSTKIGSDSIAVQ 731
           DFY+NLSKNVAFG  EA+ R                            ST   +DS  + 
Sbjct: 177 DFYYNLSKNVAFGGIEAKLR------------KREEKVDADTSEKGSSSTNTHTDSSVIN 224

Query: 732 PG-------EVDSRTPIAESSRDKVAAEQVVESSSQDK-VAAETVTEQPKRD-HKRNEDA 884
            G       E  + TP  ESS+  +  + V ++S+Q+K +A ET+ +QPK D HKR+EDA
Sbjct: 225 EGHEGHEGHEGKTSTPSKESSQ-SLDIKPVSDASAQEKALAEETLAQQPKSDHHKRSEDA 283

Query: 885 VAAAKERFLARKRAK 929
           VAAAKERFLARKRAK
Sbjct: 284 VAAAKERFLARKRAK 298


>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536956|gb|EEF38594.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 327

 Score =  256 bits (655), Expect = 6e-66
 Identities = 150/317 (47%), Positives = 189/317 (59%), Gaps = 13/317 (4%)
 Frame = +3

Query: 18  KYGLQIRVKPSSSSQHNRLSATRPPRPPPSVFLXXXXXXXXXX--ISRQASKNKSNKDYE 191
           KYGLQ+RVKP          A +PP P   +              ISR ASKNKS KD E
Sbjct: 15  KYGLQLRVKPQQQ-------AKKPPLPTKPLLFGQDEDDDNVEKEISRHASKNKSLKDIE 67

Query: 192 ELHKKALEEDPKAFDYDEVFDDMKQAAVLKTTQDKQKRESKYIKALMDKSKAREREQEIV 371
           E+HKKALEEDP AFDYD V+DDMKQ       QD+Q+R+ KYI+ALM K++ R+RE EI+
Sbjct: 68  EMHKKALEEDPSAFDYDGVYDDMKQKVAQPRHQDRQERKPKYIEALMKKAEIRQREHEII 127

Query: 372 YERKLAKERSKDEHQFQDKEKFVTGAYKRKLAEQAKWVXXXXXXXXXXQKEDITKKGDMS 551
           YE+KL KER+KD+H + DK+KFVT AYK+KLAEQAKW+          +K+D+TKK D+S
Sbjct: 128 YEKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEERLRQLKEEKDDVTKKSDLS 187

Query: 552 DFYFNLSKNVAFGAGEAEPRXXXXXXXXXXXXXXXXXXXXXXXXXXQ--PSTKIGSDSIA 725
           DFYFNL KNVAFGA E + R                          +  P +K   +S  
Sbjct: 188 DFYFNLGKNVAFGAKEIDSRKQEKQTELRKSEKLDDEAAGSTSGRGRPLPDSKSIMESSR 247

Query: 726 VQPGEVDSRTPI-------AESSRDKVAAEQVVESSSQDKVAA-ETVTEQPKRD-HKRNE 878
           V     D  +P+       +ESS     +E+ V++S Q+  A  E +  QPK+D HKRNE
Sbjct: 248 VNEEHHDGTSPVPILPRRNSESSDVNPVSERKVDTSVQENTATEEPLANQPKQDHHKRNE 307

Query: 879 DAVAAAKERFLARKRAK 929
           D VAAAKERFLARK+AK
Sbjct: 308 DTVAAAKERFLARKKAK 324


>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
           [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
           PREDICTED: nuclear speckle splicing regulatory protein
           1-like [Cucumis sativus]
          Length = 322

 Score =  251 bits (641), Expect = 3e-64
 Identities = 154/332 (46%), Positives = 188/332 (56%), Gaps = 24/332 (7%)
 Frame = +3

Query: 12  MSKYGLQIRVKPSSSSQHNRLSATRPPRPPPSVFLXXXXXXXXXXISRQASKNKSNKDYE 191
           MSKYGLQ+RVKPS   Q      TRPP P P  F           ISRQASKNK+ KD E
Sbjct: 1   MSKYGLQLRVKPSQQKQ-----PTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIE 55

Query: 192 ELHKKALEEDPKAFDYDEVFDDMKQAAVLKTTQDKQKRESKYIKALMDKSKAREREQEIV 371
           E HKKALEEDP  FDYD V+D+MK+  V     D+++R+ KYI+ LM K++ REREQEI+
Sbjct: 56  EQHKKALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEII 115

Query: 372 YERKLAKERSKDEHQFQDKEKFVTGAYKRKLAEQAKWVXXXXXXXXXXQKEDITKKGDMS 551
           YERKLAKERSKD+H +  K+KFVTGAYK+KLAEQAKW+          +KED+TKK DMS
Sbjct: 116 YERKLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMS 175

Query: 552 DFYFNLSKNVAFGAGEA------------EPRXXXXXXXXXXXXXXXXXXXXXXXXXXQP 695
           DFYF+L KNVA+GA  A            E +                          Q 
Sbjct: 176 DFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQN 235

Query: 696 STKIG-SDSIAVQPGEVDSRTPIAESSRDKVAAEQVVESSSQDKVAAET-VTEQPKRD-- 863
           S     S+    +   ++ R P +  +         +E +S   +  +T V EQPK +  
Sbjct: 236 SNLPSCSEKTIEEHPHLEERLPFSNKT-----TPSNIEGTSPPTLHDKTPVQEQPKHEQS 290

Query: 864 --------HKRNEDAVAAAKERFLARKRAKVV 935
                   HKRNEDAVAAAKERFLARKRAK V
Sbjct: 291 EQPPKSDHHKRNEDAVAAAKERFLARKRAKEV 322


>ref|NP_565644.1| Coiled-coil domain-containing protein 55 (DUF2040) [Arabidopsis
           thaliana] gi|20197674|gb|AAM15195.1| Expressed protein
           [Arabidopsis thaliana] gi|21553752|gb|AAM62845.1|
           unknown [Arabidopsis thaliana]
           gi|26452543|dbj|BAC43356.1| unknown protein [Arabidopsis
           thaliana] gi|28973091|gb|AAO63870.1| unknown protein
           [Arabidopsis thaliana] gi|51968604|dbj|BAD42994.1|
           unknown protein [Arabidopsis thaliana]
           gi|51968616|dbj|BAD43000.1| unknown protein [Arabidopsis
           thaliana] gi|330252874|gb|AEC07968.1| Coiled-coil
           domain-containing protein 55 (DUF2040) [Arabidopsis
           thaliana]
          Length = 323

 Score =  250 bits (638), Expect = 6e-64
 Identities = 150/326 (46%), Positives = 188/326 (57%), Gaps = 17/326 (5%)
 Frame = +3

Query: 12  MSKYGLQIRVKPSSSSQHNRLSATRPPRPPPSVFLXXXXXXXXXXISRQASKNKSNKDYE 191
           M KYGLQIR  PS   Q    S++RPP  P S+F           ISRQA+K K++K+ E
Sbjct: 1   MKKYGLQIRA-PSQKKQ----SSSRPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIE 55

Query: 192 ELHKKALEEDPKAFDYDEVFDDMKQAAVLKTTQDKQKRESKYIKALMDKSKAREREQEIV 371
           E HKKALEEDP AF YDEV+DDMKQ AVL   QD+++R+ +YI+ LM +++ RE+E EIV
Sbjct: 56  EQHKKALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEIV 115

Query: 372 YERKLAKERSKDEHQFQDKEKFVTGAYKRKLAEQAKWVXXXXXXXXXXQKEDITKKGDMS 551
           YERKLAKER KDEH F DKEKFVTGAYKRKL EQ KW+          +++D+TKK D+S
Sbjct: 116 YERKLAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLS 175

Query: 552 DFYFNLSKNVAFGAGEAEPRXXXXXXXXXXXXXXXXXXXXXXXXXXQ------------P 695
           DFYFN+ KNVAFGA E E +                          +            P
Sbjct: 176 DFYFNIGKNVAFGAREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRVEKKRKSP 235

Query: 696 STKIGSDSIAVQPGEVDSRTPIAES---SRDKVAAEQVVESSSQDKVAAETVTEQPK--R 860
             ++  DS         S  P+      S  ++ ++   E  S  K AA+   E PK   
Sbjct: 236 EKEVSPDSGEFGSSRSKSLEPLEAEQAVSEKEMGSDGTEERKSSIKEAAK---EVPKAIN 292

Query: 861 DHKRNEDAVAAAKERFLARKRAKVVE 938
           D KR EDA+AAAKERFLARK+AK+ E
Sbjct: 293 DQKRREDAIAAAKERFLARKKAKIEE 318


>ref|XP_002880900.1| hypothetical protein ARALYDRAFT_481627 [Arabidopsis lyrata subsp.
           lyrata] gi|297326739|gb|EFH57159.1| hypothetical protein
           ARALYDRAFT_481627 [Arabidopsis lyrata subsp. lyrata]
          Length = 325

 Score =  244 bits (624), Expect = 2e-62
 Identities = 152/328 (46%), Positives = 186/328 (56%), Gaps = 19/328 (5%)
 Frame = +3

Query: 12  MSKYGLQIRVKPSSSSQHNRLSATRPPRPPPSVFLXXXXXXXXXXISRQASKNKSNKDYE 191
           M KYGLQIR  PS   Q    S++RPP    S+F           ISRQASK K+ K+ E
Sbjct: 1   MKKYGLQIRA-PSQKKQ----SSSRPPLRLASIFGEEEDHDVEKEISRQASKTKALKEIE 55

Query: 192 ELHKKALEEDPKAFDYDEVFDDMKQAAVLKTTQDKQKRESKYIKALMDKSKAREREQEIV 371
           E HKKALEEDP AF YDEV+DDMKQ AVL   QD+++R+ +YI+ LM +++ RE+E EIV
Sbjct: 56  EQHKKALEEDPSAFAYDEVYDDMKQKAVLPRMQDREERKPRYIQHLMKQAERREKEHEIV 115

Query: 372 YERKLAKERSKDEHQFQDKEKFVTGAYKRKLAEQAKWVXXXXXXXXXXQKEDITKKGDMS 551
           YERKLAKER KDEH F DKEKFVTGAYKRKL EQ KW+          +++D+TKK D+S
Sbjct: 116 YERKLAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLS 175

Query: 552 DFYFNLSKNVAFGAGEAEPR-----XXXXXXXXXXXXXXXXXXXXXXXXXXQPSTKIGSD 716
           DFYFN+ KNVAFGA + E +                               +   K  S 
Sbjct: 176 DFYFNIGKNVAFGARDIEAKEVERLEEQRKAEKLEEQRRAEKLEELRKEETREEKKRKSP 235

Query: 717 SIAVQPGEVDSRTPIAESSRDK----VAAEQVVE--------SSSQDKVAAETVTEQPK- 857
              +   E+   +    SSR K      AEQ V         +  +D    E   E PK 
Sbjct: 236 EKELPEKELSPDSRDFGSSRSKSLEPQEAEQAVSEKKMGSDGTEERDSSIKEAAKEVPKA 295

Query: 858 -RDHKRNEDAVAAAKERFLARKRAKVVE 938
             DHKR EDA+AAAKERFLARK+AK+ E
Sbjct: 296 VNDHKRREDAIAAAKERFLARKKAKIEE 323