BLASTX nr result

ID: Cnidium21_contig00017805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017805
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   173   2e-41
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   168   6e-40
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   166   4e-39
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   165   5e-39
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]               164   8e-39

>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  173 bits (439), Expect = 2e-41
 Identities = 83/195 (42%), Positives = 119/195 (61%)
 Frame = +2

Query: 2    QRLSTLLHQKWLAKLMGLDYEICYKKGKENLAADALSRLPEKPQEAECKGMTSSQQVWLS 181
            Q++ T L QKW+ KL+G ++ + YK+GKEN  ADALSR  E  +E +   +T+    WL 
Sbjct: 936  QKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLE 995

Query: 182  EVLDSYHNDLEAQEIITGIINQNDQFMSYQYKRGLITVAEKIYVGKHSDMRSKIMWECHD 361
            ++   Y  D + Q+II  +   +    +Y+ + GL+    ++Y+    ++R +I++  H 
Sbjct: 996  QLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHS 1055

Query: 362  SPYGGHSGQETTFKKVSQFFTWPGMRKEVNTYVAACDICQRIKSGTQFPGGLLQPLPIPV 541
            SP GGHSG   T  +    F W GMRKEV  ++  CDICQ+ KS    P GLLQPLPIP 
Sbjct: 1056 SPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPT 1115

Query: 542  QIWEDISLDFIEGLP 586
            ++W DISLDFIEGLP
Sbjct: 1116 KVWTDISLDFIEGLP 1130


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  168 bits (426), Expect = 6e-40
 Identities = 87/196 (44%), Positives = 123/196 (62%)
 Frame = +2

Query: 2    QRLSTLLHQKWLAKLMGLDYEICYKKGKENLAADALSRLPEKPQEAECKGMTSSQQVWLS 181
            QRLST   QK L KL+GL Y+ICYKKG EN AADALSR      E E   ++     WL 
Sbjct: 2233 QRLSTPWQQKALTKLLGLRYKICYKKGLENGAADALSRRQSDGLE-EVSAISICLPDWLQ 2291

Query: 182  EVLDSYHNDLEAQEIITGIINQNDQFMSYQYKRGLITVAEKIYVGKHSDMRSKIMWECHD 361
            E++D Y +D EAQ+++  +        +++ + G++    +I++G +  ++ KI+   H 
Sbjct: 2292 ELIDGYQSDSEAQKLLQALSVSGAGPSNFEVQNGILYFKHRIWIGHNKLLQQKILANLHT 2351

Query: 362  SPYGGHSGQETTFKKVSQFFTWPGMRKEVNTYVAACDICQRIKSGTQFPGGLLQPLPIPV 541
            +  GGHSG   T+++V Q F+WPGMRK+V  +V  CDICQR KS      GLLQPL +P 
Sbjct: 2352 AAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPS 2411

Query: 542  QIWEDISLDFIEGLPR 589
            Q W+ I++DFIEGLP+
Sbjct: 2412 QSWQVITMDFIEGLPK 2427


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  166 bits (419), Expect = 4e-39
 Identities = 86/195 (44%), Positives = 120/195 (61%)
 Frame = +2

Query: 2   QRLSTLLHQKWLAKLMGLDYEICYKKGKENLAADALSRLPEKPQEAECKGMTSSQQVWLS 181
           QR+ TL  QKW+AKL+G DYEI YK G+EN A DALSR+P            S  ++W  
Sbjct: 93  QRVVTLEQQKWVAKLLGYDYEILYKPGRENSAVDALSRVPSSLTFNAL--FVSQAKIW-E 149

Query: 182 EVLDSYHNDLEAQEIITGIINQNDQFMSYQYKRGLITVAEKIYVGKHSDMRSKIMWECHD 361
           E+  +  +D  A       +      + Y  ++GL     ++ V   S + ++++ E HD
Sbjct: 150 EIKTAAADD--AYMTCISKLAATKPGLPYTNRQGLTFYKNRVVVPPQSHIPNQLLREFHD 207

Query: 362 SPYGGHSGQETTFKKVSQFFTWPGMRKEVNTYVAACDICQRIKSGTQFPGGLLQPLPIPV 541
           SP GGHSG   T+K+++Q F WP M + VN YV++CD+CQR K+ T  P GLLQPLPIP 
Sbjct: 208 SPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRAKASTLSPAGLLQPLPIPC 267

Query: 542 QIWEDISLDFIEGLP 586
           Q+W+DI++DFIEGLP
Sbjct: 268 QVWDDITMDFIEGLP 282


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  165 bits (418), Expect = 5e-39
 Identities = 90/198 (45%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
 Frame = +2

Query: 2    QRLSTLLHQKWLAKLMGLDYEICYKKGKENLAADALSRLPEKPQEAECKGM--TSSQQVW 175
            QR+ T   QKW++KL+G DYEI YK GK N AADALSR    P    C  +      QVW
Sbjct: 805  QRIITPEQQKWMSKLVGYDYEIVYKPGKTNQAADALSRNMTSP----CLNVFFVPQVQVW 860

Query: 176  LSEVLDSYHNDLEAQEIITGIINQNDQFMSYQYKRGLITVAEKIYVGKHSDMRSKIMWEC 355
              E+    +++   Q I  G +        YQ++ GL+    +I V   S +   ++ E 
Sbjct: 861  -DEIRHEANSNPYMQRI--GQLATKQPRQPYQWRNGLVCYNNRIVVPPGSPLIHCLLREF 917

Query: 356  HDSPYGGHSGQETTFKKVSQFFTWPGMRKEVNTYVAACDICQRIKSGTQFPGGLLQPLPI 535
            HD+P GGHS    T+K++SQ F WP MR+ V+ YVAACD+CQ+ K+ T  P GLLQPLPI
Sbjct: 918  HDTPMGGHSRILRTYKRLSQQFYWPSMRRSVHQYVAACDVCQKAKAETMSPAGLLQPLPI 977

Query: 536  PVQIWEDISLDFIEGLPR 589
            P Q+W+DI++DFI+GLPR
Sbjct: 978  PCQVWDDITMDFIDGLPR 995


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score =  164 bits (416), Expect = 8e-39
 Identities = 86/196 (43%), Positives = 121/196 (61%)
 Frame = +2

Query: 2    QRLSTLLHQKWLAKLMGLDYEICYKKGKENLAADALSRLPEKPQEAECKGMTSSQQVWLS 181
            QRLST   QK L KL+GL Y+ICYKKG EN AADALSR      E E   ++     WL 
Sbjct: 1019 QRLSTPWQQKALTKLLGLRYKICYKKGLENGAADALSRRQSDGLE-ELSAISICLSDWLQ 1077

Query: 182  EVLDSYHNDLEAQEIITGIINQNDQFMSYQYKRGLITVAEKIYVGKHSDMRSKIMWECHD 361
            E++  Y +D EAQ+++  +        +++   G++    +I++G +  ++ KI+   H 
Sbjct: 1078 ELIAGYQSDSEAQKLLQALSVSGAGPSNFEVLNGILYFKHRIWIGHNKLLQQKILANLHT 1137

Query: 362  SPYGGHSGQETTFKKVSQFFTWPGMRKEVNTYVAACDICQRIKSGTQFPGGLLQPLPIPV 541
            +  GGHSG   T+++V Q F+WPG+RK+V  +V  CDICQR KS      GLLQPL +P 
Sbjct: 1138 TAVGGHSGILVTYQRVKQLFSWPGLRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPS 1197

Query: 542  QIWEDISLDFIEGLPR 589
            Q W+ I++DFIEGLPR
Sbjct: 1198 QSWQVITMDFIEGLPR 1213


Top