BLASTX nr result

ID: Cnidium21_contig00017792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017792
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328818.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002328818.1| predicted protein [Populus trichocarpa] gi|222839116|gb|EEE77467.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
 Frame = +3

Query: 87  SWNKKRF------APNGGQSFQGGPLKKQHVYDRIG--AQGNQDKCTRCGGNHVDTECHW 242
           SW ++RF      + +GGQS   G         R       +   C  CGG+H   EC+ 
Sbjct: 232 SWVQRRFRQRPSVSGSGGQSGSSGTQSLVQTAPRSSFITPSDSSSCQHCGGSHTSAECNR 291

Query: 243 NKGACFHCGEVGHRIAQC 296
             GACF CG++GH+I +C
Sbjct: 292 RTGACFSCGQIGHKIREC 309


Top