BLASTX nr result

ID: Cnidium21_contig00017791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017791
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    59   3e-07
ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago...    59   4e-07
ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    59   5e-07
ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|222845989|gb|EEE83536.1|
           predicted protein [Populus trichocarpa]
          Length = 1054

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -1

Query: 400 DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221
           DL+ FVI S+VIWTA+A     I   +T+R  VLF+QVWKWC     ++  LS   F +P
Sbjct: 786 DLYAFVIGSYVIWTALAGARYSIEQIRTKRATVLFSQVWKWCSIVLKSLALLSIWIFVIP 845

Query: 220 V 218
           V
Sbjct: 846 V 846


>ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1123

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -1

Query: 400  DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221
            DL+ F+I S+VIWTAVA     I   + RR++VLF Q+WKWCG    +   LS   F +P
Sbjct: 853  DLYAFIIGSYVIWTAVAGVRYSIEQIRKRRSSVLFGQIWKWCGILVKSSALLSIWIFVIP 912

Query: 220  V 218
            V
Sbjct: 913  V 913


>ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago truncatula]
            gi|355508978|gb|AES90120.1| E3 ubiquitin-protein ligase
            MARCH6 [Medicago truncatula]
          Length = 1112

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = -1

Query: 400  DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221
            DL+ F+I S+VIWTAVA     I   + RRT+VL NQ+WKWC     +   LS   F +P
Sbjct: 842  DLYAFIIGSYVIWTAVAGVRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIP 901

Query: 220  V 218
            V
Sbjct: 902  V 902


>ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1124

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -1

Query: 400  DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221
            DL+ F+I S+VIWTAVA     I   + RR++VLF Q+WKWCG    +   LS   F +P
Sbjct: 854  DLYAFIIGSYVIWTAVAGVRYSIEQIRKRRSSVLFGQLWKWCGILVKSSALLSIWIFVIP 913

Query: 220  V 218
            V
Sbjct: 914  V 914


>ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|222849536|gb|EEE87083.1|
            predicted protein [Populus trichocarpa]
          Length = 1110

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/61 (45%), Positives = 36/61 (59%)
 Frame = -1

Query: 400  DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221
            DL+ FVI S+VIWTA+A     I   +T+R  VLF Q+WKWC     +   LS   F +P
Sbjct: 841  DLYAFVIGSYVIWTALAGARYSIEQIRTKRATVLFRQIWKWCSIVLKSSALLSIWIFVIP 900

Query: 220  V 218
            V
Sbjct: 901  V 901


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