BLASTX nr result
ID: Cnidium21_contig00017791
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00017791 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 59 3e-07 ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago... 59 4e-07 ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 59 5e-07 ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 >ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|222845989|gb|EEE83536.1| predicted protein [Populus trichocarpa] Length = 1054 Score = 59.7 bits (143), Expect = 2e-07 Identities = 29/61 (47%), Positives = 38/61 (62%) Frame = -1 Query: 400 DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221 DL+ FVI S+VIWTA+A I +T+R VLF+QVWKWC ++ LS F +P Sbjct: 786 DLYAFVIGSYVIWTALAGARYSIEQIRTKRATVLFSQVWKWCSIVLKSLALLSIWIFVIP 845 Query: 220 V 218 V Sbjct: 846 V 846 >ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max] Length = 1123 Score = 59.3 bits (142), Expect = 3e-07 Identities = 29/61 (47%), Positives = 38/61 (62%) Frame = -1 Query: 400 DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221 DL+ F+I S+VIWTAVA I + RR++VLF Q+WKWCG + LS F +P Sbjct: 853 DLYAFIIGSYVIWTAVAGVRYSIEQIRKRRSSVLFGQIWKWCGILVKSSALLSIWIFVIP 912 Query: 220 V 218 V Sbjct: 913 V 913 >ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago truncatula] gi|355508978|gb|AES90120.1| E3 ubiquitin-protein ligase MARCH6 [Medicago truncatula] Length = 1112 Score = 58.9 bits (141), Expect = 4e-07 Identities = 29/61 (47%), Positives = 37/61 (60%) Frame = -1 Query: 400 DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221 DL+ F+I S+VIWTAVA I + RRT+VL NQ+WKWC + LS F +P Sbjct: 842 DLYAFIIGSYVIWTAVAGVRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIP 901 Query: 220 V 218 V Sbjct: 902 V 902 >ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max] Length = 1124 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/61 (47%), Positives = 38/61 (62%) Frame = -1 Query: 400 DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221 DL+ F+I S+VIWTAVA I + RR++VLF Q+WKWCG + LS F +P Sbjct: 854 DLYAFIIGSYVIWTAVAGVRYSIEQIRKRRSSVLFGQLWKWCGILVKSSALLSIWIFVIP 913 Query: 220 V 218 V Sbjct: 914 V 914 >ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|222849536|gb|EEE87083.1| predicted protein [Populus trichocarpa] Length = 1110 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/61 (45%), Positives = 36/61 (59%) Frame = -1 Query: 400 DLFGFVIDSFVIWTAVAEPGIPISIFKTRRTAVLFNQVWKWCGNGRLTVDHLSSLTFALP 221 DL+ FVI S+VIWTA+A I +T+R VLF Q+WKWC + LS F +P Sbjct: 841 DLYAFVIGSYVIWTALAGARYSIEQIRTKRATVLFRQIWKWCSIVLKSSALLSIWIFVIP 900 Query: 220 V 218 V Sbjct: 901 V 901