BLASTX nr result

ID: Cnidium21_contig00017784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017784
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    59   7e-07

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/109 (29%), Positives = 56/109 (51%)
 Frame = +2

Query: 8   YSNVRSNILMLETLPTLSQAYRMLLQEQRHGEISKLSPPPMTDSVAFAAERRMYENRQGN 187
           YS +R NILM++ LP+ +QAY ++  E+    I+       TDS AF A  + + N++ N
Sbjct: 216 YSGIRGNILMMKPLPSTAQAYSIISHEETQRGIA-AGNNVSTDSAAFNASTQNWNNQRNN 274

Query: 188 QGSGMPQYSQGQRPNVANFFDGNKRPPSKFFCDHCKIPGHSLERCWKIH 334
             +     +   R    N ++G +   +  +C +C+  GH  E C K++
Sbjct: 275 YDNRARNQNYNNR---RNNYEGRRSNQNNSYCTYCRTSGHVREECRKLN 320


Top