BLASTX nr result

ID: Cnidium21_contig00017746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017746
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycin...   371   e-100
ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycin...   368   e-100
ref|XP_002270881.1| PREDICTED: F-box protein SKIP31 [Vitis vinif...   364   1e-98
gb|AFK43582.1| unknown [Lotus japonicus]                              359   4e-97

>ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 325

 Score =  371 bits (953), Expect = e-100
 Identities = 169/249 (67%), Positives = 207/249 (83%), Gaps = 2/249 (0%)
 Frame = +3

Query: 3   FLSKVPPEVFHDILKFLSSEDLVACSQVCRYLSFVASDETLWRHLYCMRWGLLRPKSKYC 182
           + S++PPE+F+ ILKFLSSEDLV+CS VCR+L++ ASDE LWR LYCMRWG+L P  K  
Sbjct: 77  YFSQIPPELFNHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGILPPTRKLR 136

Query: 183 DCAWKKLYLQRDEEETVQYVRNCPSEFKEFYIQMQTGKRCQVPIPSQ--DDWKILDMTVA 356
           +C WKKLY+QRD E+ V+ VR+C +EFKE+YIQMQ  KR Q P PSQ  DD  ILD T+A
Sbjct: 137 ECPWKKLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLA 196

Query: 357 DEVSTWKSSKGLTDQVVTDHACSGKNCSYHQIGDVYVCEKTGNIHVCDDACKDASADLTN 536
           D+VS+WKSS+GL+D VVTDHACSG+ CSY+ IGDV++CEKTG +HVCDD C++   D TN
Sbjct: 197 DQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVCDDTCRELVMDPTN 256

Query: 537 GLLVCTISGHCFERLMSPSDEVDQDTDQQLDAVSDEAEPFMGSGRYARAYSLGYNCADEK 716
           GLLVCTISGHC +RL+SPS+E++ DT+QQ   V+DEAEPFMGSGR+ARAY LGYNCADEK
Sbjct: 257 GLLVCTISGHCLDRLLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFARAYLLGYNCADEK 316

Query: 717 ELEACLQFC 743
           ELEA L+FC
Sbjct: 317 ELEATLRFC 325


>ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|222839148|gb|EEE77499.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  371 bits (952), Expect = e-100
 Identities = 171/248 (68%), Positives = 205/248 (82%), Gaps = 2/248 (0%)
 Frame = +3

Query: 6   LSKVPPEVFHDILKFLSSEDLVACSQVCRYLSFVASDETLWRHLYCMRWGLLRPKSKYCD 185
           LSK+PPE+F  ILKFLSSEDL+ACS VCR+L+F ASDE+LWR LYCMRWG L P +K C+
Sbjct: 84  LSKIPPELFPHILKFLSSEDLIACSLVCRFLNFAASDESLWRRLYCMRWGFLPPATKLCE 143

Query: 186 CAWKKLYLQRDEEETVQYVRNCPSEFKEFYIQMQTGKRCQVPIPSQ--DDWKILDMTVAD 359
            AWKKLY+QRDEE+ V+ VRNCP EFKE+Y+QM   KR Q P+PSQ  DD  ILD T+AD
Sbjct: 144 NAWKKLYIQRDEEDMVKLVRNCPPEFKEYYVQMNAAKRSQTPLPSQVKDDRIILDKTIAD 203

Query: 360 EVSTWKSSKGLTDQVVTDHACSGKNCSYHQIGDVYVCEKTGNIHVCDDACKDASADLTNG 539
           +VSTWKS +GLTD+VVTDHACSG+ CSY ++GDV+VCEKTGN+HVCDD C++   D TN 
Sbjct: 204 QVSTWKSRRGLTDKVVTDHACSGETCSYFKLGDVFVCEKTGNVHVCDDTCREVIMDPTNE 263

Query: 540 LLVCTISGHCFERLMSPSDEVDQDTDQQLDAVSDEAEPFMGSGRYARAYSLGYNCADEKE 719
           LLVCTISGHCF+R + PS E++ D DQQ   ++DEAEPFMGSGR+ARAY LGYNC D+KE
Sbjct: 264 LLVCTISGHCFDRWLLPS-EMEPDPDQQQGGLTDEAEPFMGSGRFARAYLLGYNCDDDKE 322

Query: 720 LEACLQFC 743
           LEA L+FC
Sbjct: 323 LEAALRFC 330


>ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 324

 Score =  368 bits (945), Expect = e-100
 Identities = 170/249 (68%), Positives = 206/249 (82%), Gaps = 2/249 (0%)
 Frame = +3

Query: 3   FLSKVPPEVFHDILKFLSSEDLVACSQVCRYLSFVASDETLWRHLYCMRWGLLRPKSKYC 182
           + S++PPE+FH ILKFLSSEDLV+CS VCR+L++ ASDE LWR LYCMRWG+L P  K  
Sbjct: 77  YFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGMLPPTRKLR 136

Query: 183 DCAWKKLYLQRDEEETVQYVRNCPSEFKEFYIQMQTGKRCQVPIPSQ--DDWKILDMTVA 356
           +C WK LY+QRD E+ V+ VR+C +EFKE+YIQMQ  KR Q P PSQ  DD  ILD T+A
Sbjct: 137 ECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLA 196

Query: 357 DEVSTWKSSKGLTDQVVTDHACSGKNCSYHQIGDVYVCEKTGNIHVCDDACKDASADLTN 536
           D+VS+WKSS+GL+D VVTDHACSG+ CSY+ IGDV++CEKTG +HVCDD C++   D TN
Sbjct: 197 DQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVCDDTCREVVMDPTN 256

Query: 537 GLLVCTISGHCFERLMSPSDEVDQDTDQQLDAVSDEAEPFMGSGRYARAYSLGYNCADEK 716
            LLVCTISGHCF+RL+SPS E++ DT+QQ   V+DEAEPFMGSGR+ARAYSLGYNCADEK
Sbjct: 257 ELLVCTISGHCFDRLLSPS-EMEPDTEQQQGGVTDEAEPFMGSGRFARAYSLGYNCADEK 315

Query: 717 ELEACLQFC 743
           ELEA L+FC
Sbjct: 316 ELEATLRFC 324


>ref|XP_002270881.1| PREDICTED: F-box protein SKIP31 [Vitis vinifera]
           gi|296085460|emb|CBI29192.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  364 bits (935), Expect = 1e-98
 Identities = 170/247 (68%), Positives = 204/247 (82%), Gaps = 2/247 (0%)
 Frame = +3

Query: 9   SKVPPEVFHDILKFLSSEDLVACSQVCRYLSFVASDETLWRHLYCMRWGLLRPKSKYCDC 188
           SK+PPE+FH ILKFLSSEDLVACS VCR+L+  ASDE+LWR LYCMRWGLL+P  K+  C
Sbjct: 61  SKIPPELFHHILKFLSSEDLVACSLVCRFLNCAASDESLWRRLYCMRWGLLQPTKKFRQC 120

Query: 189 AWKKLYLQRDEEETVQYVRNCPSEFKEFYIQMQTGKRCQVPIPSQ--DDWKILDMTVADE 362
           AWKKLY++RDEE+ +++VRNCPSEFKE+YIQMQ  KR Q P+ SQ  DD  ILD TVAD+
Sbjct: 121 AWKKLYIERDEEDMIEFVRNCPSEFKEYYIQMQVAKRSQAPLLSQVNDDRIILDKTVADQ 180

Query: 363 VSTWKSSKGLTDQVVTDHACSGKNCSYHQIGDVYVCEKTGNIHVCDDACKDASADLTNGL 542
           VS+WKSS+GLTD+V  DH CSG  C+Y+QIGDV+VCEKTG +HVCDD C++   D  N +
Sbjct: 181 VSSWKSSRGLTDKVDIDHNCSGVTCTYYQIGDVFVCEKTGRVHVCDDTCREVVTDTANDI 240

Query: 543 LVCTISGHCFERLMSPSDEVDQDTDQQLDAVSDEAEPFMGSGRYARAYSLGYNCADEKEL 722
           +VCTISGHCF+RL+  SDE + D +QQ   V+DEAEPFMGSGR+ARAY LGYNCADEKEL
Sbjct: 241 VVCTISGHCFDRLL-VSDE-EPDIEQQQGGVTDEAEPFMGSGRFARAYLLGYNCADEKEL 298

Query: 723 EACLQFC 743
           EA L+FC
Sbjct: 299 EAALRFC 305


>gb|AFK43582.1| unknown [Lotus japonicus]
          Length = 328

 Score =  359 bits (922), Expect = 4e-97
 Identities = 165/249 (66%), Positives = 201/249 (80%), Gaps = 2/249 (0%)
 Frame = +3

Query: 3   FLSKVPPEVFHDILKFLSSEDLVACSQVCRYLSFVASDETLWRHLYCMRWGLLRPKSKYC 182
           F SK+PPE FH ILKFLSSEDL++CS VC +L++ ASDE LWR LYCMRWGLL P  K  
Sbjct: 81  FFSKIPPEFFHHILKFLSSEDLISCSAVCTFLNYAASDEALWRRLYCMRWGLLPPTRKLR 140

Query: 183 DCAWKKLYLQRDEEETVQYVRNCPSEFKEFYIQMQTGKRCQVPIPSQ--DDWKILDMTVA 356
           +C W+ LY+QRD ++ V+ VRNC +EFKE+YIQMQ  KR Q P PSQ  DD  ILD T+A
Sbjct: 141 ECPWENLYIQRDGDDMVELVRNCQNEFKEYYIQMQAAKRSQAPNPSQLNDDRIILDKTLA 200

Query: 357 DEVSTWKSSKGLTDQVVTDHACSGKNCSYHQIGDVYVCEKTGNIHVCDDACKDASADLTN 536
           D+VS+WKSS+GL+D VVTDHACSG+ CSY+ IGDV++CEKTG +HVCD+ C++   D TN
Sbjct: 201 DQVSSWKSSRGLSDTVVTDHACSGETCSYYAIGDVFICEKTGQVHVCDETCREVVMDPTN 260

Query: 537 GLLVCTISGHCFERLMSPSDEVDQDTDQQLDAVSDEAEPFMGSGRYARAYSLGYNCADEK 716
            LLVCTISGHCF+RL+SP+ E++ D +QQ    +DEAEPFMGSGR+ARAY LGYNCADEK
Sbjct: 261 ELLVCTISGHCFDRLLSPA-EMEPDAEQQQGGAADEAEPFMGSGRFARAYLLGYNCADEK 319

Query: 717 ELEACLQFC 743
           ELEA L+FC
Sbjct: 320 ELEATLRFC 328


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