BLASTX nr result

ID: Cnidium21_contig00017742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017742
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149568.1| PREDICTED: uncharacterized WD repeat-contain...   261   1e-67
gb|AFK46241.1| unknown [Lotus japonicus]                              259   3e-67
gb|AFK36155.1| unknown [Medicago truncatula]                          256   3e-66
ref|XP_003598295.1| WD-repeat protein-like protein [Medicago tru...   256   3e-66
ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|2...   253   2e-65

>ref|XP_004149568.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
           gi|449526670|ref|XP_004170336.1| PREDICTED:
           uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
          Length = 445

 Score =  261 bits (667), Expect = 1e-67
 Identities = 124/142 (87%), Positives = 135/142 (95%)
 Frame = -3

Query: 774 DSISGKTVAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDIRKLSKSVGALRGNLGA 595
           DS +GKTVA L GHLDFSFASAWH DG+TFATGNQDKTCRIWD+R LSKSV AL+GNLGA
Sbjct: 303 DSQTGKTVASLSGHLDFSFASAWHSDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGA 362

Query: 594 IRSIRYSSDGRFMAMAEPADFVHVFDVKSGYDKEQEIDFFGEISGMSYSPDTESLFIGVW 415
           IRSIRYSSDGR+MAMAEPADFVHVFDVKSGY+KEQEIDFFGEISG+S+SPDTESLFIGVW
Sbjct: 363 IRSIRYSSDGRYMAMAEPADFVHVFDVKSGYEKEQEIDFFGEISGVSFSPDTESLFIGVW 422

Query: 414 DRTYGSLLEFGRRRDYSYLDAL 349
           DRTYGSLLE+ RRR+YSYLD+L
Sbjct: 423 DRTYGSLLEYHRRRNYSYLDSL 444


>gb|AFK46241.1| unknown [Lotus japonicus]
          Length = 183

 Score =  259 bits (663), Expect = 3e-67
 Identities = 118/143 (82%), Positives = 137/143 (95%)
 Frame = -3

Query: 774 DSISGKTVAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDIRKLSKSVGALRGNLGA 595
           DS +GKT+  LCGHLDFSFASAWHPDG+TFATGNQDKTCRIWD+R LSKSV  L+GNLGA
Sbjct: 41  DSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGA 100

Query: 594 IRSIRYSSDGRFMAMAEPADFVHVFDVKSGYDKEQEIDFFGEISGMSYSPDTESLFIGVW 415
           IRSIRY+SDG+++AMAEPADFVHV+DVKSGY++EQEIDFFGEISG+S+SPDTESLFIGVW
Sbjct: 101 IRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGISFSPDTESLFIGVW 160

Query: 414 DRTYGSLLEFGRRRDYSYLDALI 346
           DRTYGSLLE+GRR++YSYLD++I
Sbjct: 161 DRTYGSLLEYGRRQNYSYLDSMI 183


>gb|AFK36155.1| unknown [Medicago truncatula]
          Length = 447

 Score =  256 bits (655), Expect = 3e-66
 Identities = 118/143 (82%), Positives = 137/143 (95%)
 Frame = -3

Query: 774 DSISGKTVAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDIRKLSKSVGALRGNLGA 595
           DS +GKT+APL GHLDFSFAS+W+PDG+TFATGNQDKTCRIWD+R LSKSV  L+GNLGA
Sbjct: 305 DSQNGKTIAPLSGHLDFSFASSWNPDGVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGA 364

Query: 594 IRSIRYSSDGRFMAMAEPADFVHVFDVKSGYDKEQEIDFFGEISGMSYSPDTESLFIGVW 415
           IRSIR+SSDG++MA+AEPADFVHV+DVKSGY+KEQEIDFFGEISG+S+SPDTESLFIGVW
Sbjct: 365 IRSIRHSSDGKYMAIAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 424

Query: 414 DRTYGSLLEFGRRRDYSYLDALI 346
           DRTYGSLLE+GRR +YSYLD++I
Sbjct: 425 DRTYGSLLEYGRRHNYSYLDSMI 447


>ref|XP_003598295.1| WD-repeat protein-like protein [Medicago truncatula]
           gi|355487343|gb|AES68546.1| WD-repeat protein-like
           protein [Medicago truncatula]
          Length = 489

 Score =  256 bits (655), Expect = 3e-66
 Identities = 118/143 (82%), Positives = 137/143 (95%)
 Frame = -3

Query: 774 DSISGKTVAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDIRKLSKSVGALRGNLGA 595
           DS +GKT+APL GHLDFSFAS+W+PDG+TFATGNQDKTCRIWD+R LSKSV  L+GNLGA
Sbjct: 347 DSQNGKTIAPLSGHLDFSFASSWNPDGVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGA 406

Query: 594 IRSIRYSSDGRFMAMAEPADFVHVFDVKSGYDKEQEIDFFGEISGMSYSPDTESLFIGVW 415
           IRSIR+SSDG++MA+AEPADFVHV+DVKSGY+KEQEIDFFGEISG+S+SPDTESLFIGVW
Sbjct: 407 IRSIRHSSDGKYMAIAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 466

Query: 414 DRTYGSLLEFGRRRDYSYLDALI 346
           DRTYGSLLE+GRR +YSYLD++I
Sbjct: 467 DRTYGSLLEYGRRHNYSYLDSMI 489


>ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|222872130|gb|EEF09261.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  253 bits (647), Expect = 2e-65
 Identities = 116/143 (81%), Positives = 134/143 (93%)
 Frame = -3

Query: 774 DSISGKTVAPLCGHLDFSFASAWHPDGLTFATGNQDKTCRIWDIRKLSKSVGALRGNLGA 595
           DS SGKTV  L GHLDFSFASAWHPDG+TFATGNQDKTCRIWD+R LSKS+  L+GNLGA
Sbjct: 303 DSSSGKTVTSLSGHLDFSFASAWHPDGVTFATGNQDKTCRIWDVRNLSKSLAVLKGNLGA 362

Query: 594 IRSIRYSSDGRFMAMAEPADFVHVFDVKSGYDKEQEIDFFGEISGMSYSPDTESLFIGVW 415
           IRSIRY+SDG++MAMAEPADFVHV+DVK+GY+KEQEIDFFGEISG+S+SPDTE+L+IGVW
Sbjct: 363 IRSIRYTSDGQYMAMAEPADFVHVYDVKNGYEKEQEIDFFGEISGVSFSPDTEALYIGVW 422

Query: 414 DRTYGSLLEFGRRRDYSYLDALI 346
           DRTYGSLLE+GR R+YSYLD+ +
Sbjct: 423 DRTYGSLLEYGRCRNYSYLDSFV 445


Top