BLASTX nr result

ID: Cnidium21_contig00017727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017727
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16638.3| unnamed protein product [Vitis vinifera]              136   4e-63
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g...   136   4e-63
ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g...   135   3e-62
ref|XP_002511610.1| conserved hypothetical protein [Ricinus comm...   140   5e-62
ref|XP_003552465.1| PREDICTED: poly(rC)-binding protein 1-like [...   127   2e-40

>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  136 bits (342), Expect(2) = 4e-63
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +1

Query: 4   SGQNIENLRNSSGATITVLGQNQMPLCASLHESDRVVQLSGEVPDVLKALVDIGCQLRDN 183
           SGQNIE LRNSSGATIT+L QNQ+PLCAS H+SDR+VQ+SG+VP VLKAL +IGCQLR+N
Sbjct: 171 SGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN 230

Query: 184 PPKQVISISPAYNYALHRTPQHYVDPSS 267
           PP+QVISISP YN   +RT Q Y+DP+S
Sbjct: 231 PPRQVISISPIYNPNTNRTSQQYLDPAS 258



 Score =  131 bits (329), Expect(2) = 4e-63
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +3

Query: 363 AEYVTMEMMISEAMVGGLIGRCGSNISRIRTESGAAIKVHGGKGEQNLRQVHLGGSAQQV 542
           A+YVT+ MMI E +VGGLIGRCGSNISRIR ESGA IKV+GGKGEQN RQ+  GGSAQQV
Sbjct: 259 ADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQQV 318

Query: 543 ALAKQRIDEYVYSQLMPSGGQQPGV 617
           ALAKQR+DEY+YSQLM   G Q  V
Sbjct: 319 ALAKQRVDEYIYSQLMQQAGAQHSV 343


>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 343

 Score =  136 bits (342), Expect(2) = 4e-63
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +1

Query: 4   SGQNIENLRNSSGATITVLGQNQMPLCASLHESDRVVQLSGEVPDVLKALVDIGCQLRDN 183
           SGQNIE LRNSSGATIT+L QNQ+PLCAS H+SDR+VQ+SG+VP VLKAL +IGCQLR+N
Sbjct: 171 SGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN 230

Query: 184 PPKQVISISPAYNYALHRTPQHYVDPSS 267
           PP+QVISISP YN   +RT Q Y+DP+S
Sbjct: 231 PPRQVISISPIYNPNTNRTSQQYLDPAS 258



 Score =  131 bits (329), Expect(2) = 4e-63
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +3

Query: 363 AEYVTMEMMISEAMVGGLIGRCGSNISRIRTESGAAIKVHGGKGEQNLRQVHLGGSAQQV 542
           A+YVT+ MMI E +VGGLIGRCGSNISRIR ESGA IKV+GGKGEQN RQ+  GGSAQQV
Sbjct: 259 ADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQQV 318

Query: 543 ALAKQRIDEYVYSQLMPSGGQQPGV 617
           ALAKQR+DEY+YSQLM   G Q  V
Sbjct: 319 ALAKQRVDEYIYSQLMQQAGAQHSV 343


>ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 385

 Score =  135 bits (341), Expect(2) = 3e-62
 Identities = 66/88 (75%), Positives = 76/88 (86%)
 Frame = +1

Query: 4   SGQNIENLRNSSGATITVLGQNQMPLCASLHESDRVVQLSGEVPDVLKALVDIGCQLRDN 183
           SGQNIE LR+SSGA+ITVL  NQ+PLCAS HESDRVVQLSG+VP V+KAL +IGCQLR+N
Sbjct: 213 SGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLREN 272

Query: 184 PPKQVISISPAYNYALHRTPQHYVDPSS 267
           PP+QVISISP YNYA  R  Q Y+DP+S
Sbjct: 273 PPRQVISISPTYNYAAIRPSQPYLDPTS 300



 Score =  128 bits (322), Expect(2) = 3e-62
 Identities = 63/84 (75%), Positives = 70/84 (83%)
 Frame = +3

Query: 366 EYVTMEMMISEAMVGGLIGRCGSNISRIRTESGAAIKVHGGKGEQNLRQVHLGGSAQQVA 545
           +YVT EM+ISE MVGGLIGRCGSNISRIR ESGA IKV+GGKGEQ  RQ+  GGSAQQVA
Sbjct: 302 DYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVA 361

Query: 546 LAKQRIDEYVYSQLMPSGGQQPGV 617
           LAKQR+DEY+YSQL+   G Q  V
Sbjct: 362 LAKQRVDEYIYSQLIQQTGTQQSV 385


>ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
           gi|223548790|gb|EEF50279.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  140 bits (352), Expect(2) = 5e-62
 Identities = 69/88 (78%), Positives = 76/88 (86%)
 Frame = +1

Query: 4   SGQNIENLRNSSGATITVLGQNQMPLCASLHESDRVVQLSGEVPDVLKALVDIGCQLRDN 183
           SGQNIE LRNSSGATITVL  NQ+PLCAS HESDRVVQ+SG+VP VLKA+ +IGCQLR+N
Sbjct: 183 SGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLREN 242

Query: 184 PPKQVISISPAYNYALHRTPQHYVDPSS 267
           PPKQVISISP YNYA  R  Q YVDP+S
Sbjct: 243 PPKQVISISPTYNYATVRPTQPYVDPTS 270



 Score =  124 bits (310), Expect(2) = 5e-62
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = +3

Query: 363 AEYVTMEMMISEAMVGGLIGRCGSNISRIRTESGAAIKVHGGKGEQNLRQVHLGGSAQQV 542
           A+YVT+EMM+SE +VGGLIGRCGSNISRIR ESGA IKV+GGKGE+  R +  GG+AQQV
Sbjct: 271 ADYVTLEMMVSETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEKKHRHIQFGGTAQQV 330

Query: 543 ALAKQRIDEYVYSQLMPSGG 602
           ALAKQR+DEY+YSQL+   G
Sbjct: 331 ALAKQRVDEYIYSQLVQQAG 350


>ref|XP_003552465.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
          Length = 127

 Score =  127 bits (319), Expect(2) = 2e-40
 Identities = 62/81 (76%), Positives = 69/81 (85%)
 Frame = +3

Query: 366 EYVTMEMMISEAMVGGLIGRCGSNISRIRTESGAAIKVHGGKGEQNLRQVHLGGSAQQVA 545
           +YVT EM+ISE MVGGLIGRCGSNISRIR ESGA IKV+GGKGEQ  RQ+  GGSAQQVA
Sbjct: 44  DYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVA 103

Query: 546 LAKQRIDEYVYSQLMPSGGQQ 608
           LAKQR+DEY+YSQL+   G Q
Sbjct: 104 LAKQRVDEYIYSQLIQQTGTQ 124



 Score = 64.7 bits (156), Expect(2) = 2e-40
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = +1

Query: 142 LKALVDIGCQLRDNPPKQVISISPAYNYALHRTPQHYVDPSS 267
           +KAL +IGCQLR+NPP+QVISISP YNYA  R  Q Y+DP+S
Sbjct: 1   MKALEEIGCQLRENPPRQVISISPTYNYAAIRPSQPYLDPTS 42


Top