BLASTX nr result

ID: Cnidium21_contig00017704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017704
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana t...   194   6e-48
gb|AFK34998.1| unknown [Lotus japonicus]                              194   6e-48
dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|...   194   6e-48
ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [C...   193   1e-47
ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform...   192   2e-47

>gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana tabacum]
          Length = 108

 Score =  194 bits (493), Expect = 6e-48
 Identities = 91/108 (84%), Positives = 102/108 (94%)
 Frame = -2

Query: 418 LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 239
           ++A+ A+KAC PI+WSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MSAYNAFKACAPISWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 238 MLQQVKRLVVIETEEMYKARKQKIADHQAIRPPLVVNHFPAPASGSSQ 95
           MLQQVKRLVVIETEEMYKARK+K++DH+A+RPPLVVNH  APA+ S Q
Sbjct: 61  MLQQVKRLVVIETEEMYKARKEKLSDHKALRPPLVVNHHAAPAADSVQ 108


>gb|AFK34998.1| unknown [Lotus japonicus]
          Length = 116

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/106 (87%), Positives = 100/106 (94%)
 Frame = -2

Query: 418 LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 239
           +NAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 10  MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 69

Query: 238 MLQQVKRLVVIETEEMYKARKQKIADHQAIRPPLVVNHFPAPASGS 101
           MLQQVKRLVVIETEEMYKARKQK   H+A+RPPLV+NH P+ A+G+
Sbjct: 70  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGT 115


>dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|AFK47535.1| unknown
           [Lotus japonicus]
          Length = 107

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/106 (87%), Positives = 100/106 (94%)
 Frame = -2

Query: 418 LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 239
           +NAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60

Query: 238 MLQQVKRLVVIETEEMYKARKQKIADHQAIRPPLVVNHFPAPASGS 101
           MLQQVKRLVVIETEEMYKARKQK   H+A+RPPLV+NH P+ A+G+
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQPSSATGT 106


>ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [Cucumis sativus]
           gi|449522520|ref|XP_004168274.1| PREDICTED: 50S
           ribosomal protein L30-like [Cucumis sativus]
          Length = 108

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/107 (84%), Positives = 101/107 (94%)
 Frame = -2

Query: 418 LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 239
           +NAFKA+KA VPIAWS NLYITLVRG+PGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 238 MLQQVKRLVVIETEEMYKARKQKIADHQAIRPPLVVNHFPAPASGSS 98
           M+QQVKRLVV+ETEEMYKARKQK+  H+A+RPPLV+NH PAP+S S+
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASA 107


>ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform 1 [Vitis vinifera]
           gi|359474731|ref|XP_003631524.1| PREDICTED: 50S
           ribosomal protein L30 isoform 2 [Vitis vinifera]
           gi|359474733|ref|XP_003631525.1| PREDICTED: 50S
           ribosomal protein L30 isoform 3 [Vitis vinifera]
           gi|296085477|emb|CBI29209.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/108 (86%), Positives = 101/108 (93%), Gaps = 1/108 (0%)
 Frame = -2

Query: 418 LNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 239
           +NAFKA+KACVP+AWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 238 MLQQVKRLVVIETEEMYKARKQKIADHQAIRPPLVVNH-FPAPASGSS 98
           MLQQVKRLVVIETEEMYKARK K  +H+A+RPPLV+NH  P PA+ SS
Sbjct: 61  MLQQVKRLVVIETEEMYKARKLKETNHRALRPPLVINHVLPPPANDSS 108


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