BLASTX nr result

ID: Cnidium21_contig00017633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017633
         (1660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   111   5e-22
emb|CBI33981.3| unnamed protein product [Vitis vinifera]              110   8e-22
ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus co...   100   9e-19
ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arab...    95   6e-17
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]             94   8e-17

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  111 bits (278), Expect = 5e-22
 Identities = 80/246 (32%), Positives = 125/246 (50%), Gaps = 26/246 (10%)
 Frame = +3

Query: 438  EEC--FFFPDQFQVTGAESYVSENH--KTMRTIGDLIPGTKTTMYEYQREGFKLIWKNIA 605
            E+C   F   QFQ  G  S    +H      T+ D+IPG + +MY +Q EGF+ IWKN+A
Sbjct: 444  EDCNSIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVA 503

Query: 606  SGIIIEDLQKP-LSSSGSGCLISHAPDTGKTSLTLVILQSFMKMYPESTTIIIAPKSLLL 782
             GI +++L++   S  GSGC+ISHAP TGKT LT+V LQ++M++YP    +IIAP+++LL
Sbjct: 504  GGIYLDELKRSSFSDGGSGCIISHAPGTGKTRLTIVFLQTYMELYPACRPVIIAPRTMLL 563

Query: 783  PQITVCFVSDANVILNVSTKDKTIGQKNNITITN-----------ANNV-------WKKS 908
                     + ++  +   K +  G K NIT  N           A ++       WKK 
Sbjct: 564  TWEEEFKKWNVDIPFHNLNKLEYSG-KENITALNFLRRISHQGQSAKSIRMVKLYSWKK- 621

Query: 909  GMLLDRNQIGFLLSVFSNVVFANIIMPGNTAVPCKKQQNRGFARV---KFFYYPPHMLRM 1079
                DR+ +G   ++F  +    ++         KK + + + +V   K     P +L +
Sbjct: 622  ----DRSILGISYTLFEKLAGERVLADQEN----KKVKVQDYTKVQVRKILLELPGLLVL 673

Query: 1080 GQGQTP 1097
             +G TP
Sbjct: 674  DEGHTP 679


>emb|CBI33981.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  110 bits (276), Expect = 8e-22
 Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
 Frame = +3

Query: 438 EEC--FFFPDQFQVTGAESYVSENH--KTMRTIGDLIPGTKTTMYEYQREGFKLIWKNIA 605
           E+C   F   QFQ  G  S    +H      T+ D+IPG + +MY +Q EGF+ IWKN+A
Sbjct: 19  EDCNSIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVA 78

Query: 606 SGIIIEDLQKP-LSSSGSGCLISHAPDTGKTSLTLVILQSFMKMYPESTTIIIAPKSLLL 782
            GI +++L++   S  GSGC+ISHAP TGKT LT+V LQ++M++YP    +IIAP+++LL
Sbjct: 79  GGIYLDELKRSSFSDGGSGCIISHAPGTGKTRLTIVFLQTYMELYPACRPVIIAPRTMLL 138


>ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis]
           gi|223543519|gb|EEF45050.1| ATP-dependent helicase,
           putative [Ricinus communis]
          Length = 1138

 Score =  100 bits (250), Expect = 9e-19
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = +3

Query: 519 TIGDLIPGTKTTMYEYQREGFKLIWKNIASGIIIEDL-QKPLSSSGSGCLISHAPDTGKT 695
           T+  +IPG    ++E+QREGF+ +WKNIA GI ++ L ++     GSGC+ISHAP TGKT
Sbjct: 541 TVWGIIPGIGRDLHEHQREGFEFLWKNIAGGIYLDKLKERTRFDGGSGCIISHAPGTGKT 600

Query: 696 SLTLVILQSFMKMYPESTTIIIAPKSLLL 782
            L +V LQS+MK+YPE   +II P +LLL
Sbjct: 601 RLAIVFLQSYMKLYPECRPLIITPSTLLL 629


>ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp.
            lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein
            ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata]
          Length = 1406

 Score = 94.7 bits (234), Expect = 6e-17
 Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = +3

Query: 519  TIGDLIPGTKTTMYEYQREGFKLIWKNIASGIIIEDLQK-PLSSSGSGCLISHAPDTGKT 695
            T+ D IPG K+ MY +Q+EGF+ IWKN+A  I++ +L+    S    GC++SHAP TGKT
Sbjct: 807  TVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTILLNELKDFENSDETGGCIMSHAPGTGKT 866

Query: 696  SLTLVILQSFMKMYPESTTIIIAPKSLLL 782
             LT++ LQ++++ +P+   +IIAP SLLL
Sbjct: 867  RLTIIFLQAYLQCFPDCKPVIIAPASLLL 895


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = +3

Query: 519  TIGDLIPGTKTTMYEYQREGFKLIWKNIASGIIIEDLQK-PLSSSGSGCLISHAPDTGKT 695
            T+ D IPG K+ MY +Q+EGF+ IWKN+A  I++ +L+    S    GC++SHAP TGKT
Sbjct: 866  TVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMSHAPGTGKT 925

Query: 696  SLTLVILQSFMKMYPESTTIIIAPKSLLL 782
             LT++ LQ++++ +P+   +IIAP SLLL
Sbjct: 926  RLTIIFLQAYLQCFPDCKPVIIAPASLLL 954


Top