BLASTX nr result
ID: Cnidium21_contig00017624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00017624 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ... 102 4e-20 ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like... 99 4e-19 ref|XP_003546755.1| PREDICTED: 60S ribosomal protein L18a-1-like... 96 4e-18 ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|1... 96 4e-18 gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis] 92 4e-17 >ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis] gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis] Length = 166 Score = 102 bits (253), Expect = 4e-20 Identities = 50/79 (63%), Positives = 55/79 (69%), Gaps = 8/79 (10%) Frame = +2 Query: 158 QYHQQHDEEQ----PPLQYGTFQGVANYPQPQP----AMGFPHPVPPPEHSAQPHYYAHG 313 QYH QH ++ PP QYGTFQGVANYP P P +GFP PVPPP S +P Y HG Sbjct: 20 QYHHQHPQQSQPPPPPPQYGTFQGVANYPPPHPPQHPVIGFPQPVPPPGAS-EPPAYPHG 78 Query: 314 YQAVPGYAVVEGRPIRERR 370 YQ VPGYAV EGRP+RERR Sbjct: 79 YQTVPGYAVAEGRPVRERR 97 >ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max] Length = 160 Score = 99.0 bits (245), Expect = 4e-19 Identities = 51/78 (65%), Positives = 54/78 (69%), Gaps = 9/78 (11%) Frame = +2 Query: 164 HQQHDEEQPP----LQYGTFQGVANYP--QPQPAMGFPHPVPPP---EHSAQPHYYAHGY 316 H H QP QYGTFQGVANYP QP PA+GFPHPVPPP + SA P Y GY Sbjct: 14 HHNHPPPQPQPFPAAQYGTFQGVANYPPPQPHPAIGFPHPVPPPGAVDSSAPPPPYYPGY 73 Query: 317 QAVPGYAVVEGRPIRERR 370 QAVPGYAV EGRP+RERR Sbjct: 74 QAVPGYAVAEGRPVRERR 91 >ref|XP_003546755.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max] Length = 161 Score = 95.5 bits (236), Expect = 4e-18 Identities = 47/66 (71%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +2 Query: 188 PPLQYGTFQGVANYP---QPQPAMGFPHPVPPP---EHSAQPHYYAHGYQAVPGYAVVEG 349 P QYGTFQGVANYP QP PA+GFPHPVPPP + SA P Y GYQAVPGYAV EG Sbjct: 26 PAAQYGTFQGVANYPPPPQPHPAIGFPHPVPPPGAADSSAPPPPYYPGYQAVPGYAVAEG 85 Query: 350 RPIRER 367 RP+RER Sbjct: 86 RPVRER 91 >ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|118486768|gb|ABK95219.1| unknown [Populus trichocarpa] gi|222846181|gb|EEE83728.1| predicted protein [Populus trichocarpa] Length = 156 Score = 95.5 bits (236), Expect = 4e-18 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 7/89 (7%) Frame = +2 Query: 125 LKKMSEEKGVGQYHQQHDEEQPPL-----QYGTFQGVANYPQPQPA--MGFPHPVPPPEH 283 + + +GV H+ H+++ PP QYGTFQGVANYP P + +GFP PVPPP Sbjct: 1 MSDQEKNRGVVVDHRHHEDQPPPPPPPQPQYGTFQGVANYPPPSQSHVIGFPQPVPPPGI 60 Query: 284 SAQPHYYAHGYQAVPGYAVVEGRPIRERR 370 +A+P YA GYQ VPGYAV EGRP+R+RR Sbjct: 61 TAEP--YAQGYQTVPGYAVAEGRPVRQRR 87 >gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis] Length = 151 Score = 92.0 bits (227), Expect = 4e-17 Identities = 47/75 (62%), Positives = 50/75 (66%), Gaps = 6/75 (8%) Frame = +2 Query: 164 HQQHDEEQPPLQYGTFQGVANYPQP--QPAMGFPHPVPPP----EHSAQPHYYAHGYQAV 325 HQ H QYGTFQGVANYP P QP +GFP PVPPP S P YYA+ YQ V Sbjct: 16 HQHH-------QYGTFQGVANYPPPHHQPVIGFPQPVPPPGATEPSSPLPPYYAYAYQTV 68 Query: 326 PGYAVVEGRPIRERR 370 PGYAV EGRP+RERR Sbjct: 69 PGYAVAEGRPVRERR 83