BLASTX nr result

ID: Cnidium21_contig00017617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017617
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108
ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   394   e-107
ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis ...   393   e-107
gb|AAG42754.1|AF302663_1 ubiquitin-specific protease 12 [Arabido...   392   e-107

>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  395 bits (1016), Expect = e-108
 Identities = 196/274 (71%), Positives = 217/274 (79%)
 Frame = +1

Query: 1   DALSLPYGWTSRAQFRMSVINHIDPKYNVKKDAEHIFQARESDWGFTSFMPLNELXXXXX 180
           D+ +LPYGW+  AQF ++VIN +  KY+++KD +H F ARESDWGFTSFMPL EL     
Sbjct: 104 DSTNLPYGWSRYAQFSLTVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGR 163

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEADVAVRKVIDYRGYDSKKMTGYVGLKNQG 360
                                        +EADVAVR+VIDY  +DSKK TGYVGLKNQG
Sbjct: 164 GYLVNDSCI--------------------VEADVAVRRVIDYWSHDSKKETGYVGLKNQG 203

Query: 361 ATCYMNSLLQFLYHIPYFRKAVYHMPTTENEIPSASIPLALQTLFFKLQYHDTSVATKEL 540
           ATCYMNSLLQ LYHIPYFRKAVYHMPTTEN+IPS SIPLALQ+LF+KLQY DTSVATKEL
Sbjct: 204 ATCYMNSLLQTLYHIPYFRKAVYHMPTTENDIPSGSIPLALQSLFYKLQYSDTSVATKEL 263

Query: 541 TKSFGWETCDSLMQHDVQELNRVLSEKLEQKMKGTAVEGTIQKLFEGHHMNYIECINVDF 720
           TKSFGW+T DS MQHDVQELNRVLSEKLE KMKGT VEGTIQ+LFEGHHMNYIECINVD+
Sbjct: 264 TKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDY 323

Query: 721 KSVRKESFHDIQLDVKGCRDVYASFDKYVEVEHL 822
           KS RKESF+D+QLDVKGCRDVYASFDKYVEVE L
Sbjct: 324 KSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL 357


>ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|222850785|gb|EEE88332.1|
           predicted protein [Populus trichocarpa]
          Length = 1131

 Score =  395 bits (1014), Expect = e-108
 Identities = 196/274 (71%), Positives = 216/274 (78%)
 Frame = +1

Query: 1   DALSLPYGWTSRAQFRMSVINHIDPKYNVKKDAEHIFQARESDWGFTSFMPLNELXXXXX 180
           D+ +LPYGW+  AQF ++VIN +  KY+++KD +H F ARESDWGFTSFMPL EL     
Sbjct: 104 DSATLPYGWSRYAQFSLTVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGR 163

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEADVAVRKVIDYRGYDSKKMTGYVGLKNQG 360
                                        +EADVAVRKVIDY  +DSKK TGYVGLKNQG
Sbjct: 164 GYLVNDTCV--------------------VEADVAVRKVIDYWSHDSKKETGYVGLKNQG 203

Query: 361 ATCYMNSLLQFLYHIPYFRKAVYHMPTTENEIPSASIPLALQTLFFKLQYHDTSVATKEL 540
           ATCYMNSLLQ LYHIPYFRKAVYHMPTTEN+IPS SIPLALQ+LF+KLQY DTSVATKEL
Sbjct: 204 ATCYMNSLLQTLYHIPYFRKAVYHMPTTENDIPSGSIPLALQSLFYKLQYSDTSVATKEL 263

Query: 541 TKSFGWETCDSLMQHDVQELNRVLSEKLEQKMKGTAVEGTIQKLFEGHHMNYIECINVDF 720
           TKSFGW+T DS MQHDVQELNRVL EKLE KMKGT VEGTIQ+LFEGHHMNYIECINVD+
Sbjct: 264 TKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDY 323

Query: 721 KSVRKESFHDIQLDVKGCRDVYASFDKYVEVEHL 822
           KS RKESF+D+QLDVKGCRDVYASFDKYVEVE L
Sbjct: 324 KSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL 357


>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
           sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
           sativus]
          Length = 1118

 Score =  394 bits (1011), Expect = e-107
 Identities = 196/274 (71%), Positives = 217/274 (79%)
 Frame = +1

Query: 1   DALSLPYGWTSRAQFRMSVINHIDPKYNVKKDAEHIFQARESDWGFTSFMPLNELXXXXX 180
           D+ SLPYGW+  AQF + VIN I  KY+V+KD +H F ARESDWGFTSFMPL+EL     
Sbjct: 106 DSASLPYGWSRYAQFSLGVINQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPTR 165

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEADVAVRKVIDYRGYDSKKMTGYVGLKNQG 360
                                        +EA+V VR+V+DY  YDSKK TG+VGLKNQG
Sbjct: 166 GYLVNDTLI--------------------VEAEVLVRRVVDYWTYDSKKETGFVGLKNQG 205

Query: 361 ATCYMNSLLQFLYHIPYFRKAVYHMPTTENEIPSASIPLALQTLFFKLQYHDTSVATKEL 540
           ATCYMNSLLQ LYHIPYFRKAVYHMPTTEN++PSASIPLALQ+LF+KLQY D+SVATKEL
Sbjct: 206 ATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSASIPLALQSLFYKLQYSDSSVATKEL 265

Query: 541 TKSFGWETCDSLMQHDVQELNRVLSEKLEQKMKGTAVEGTIQKLFEGHHMNYIECINVDF 720
           TKSFGW+T DS MQHDVQELNRVLSEKLE KMKGT VEGTIQKLFEGHHMNYIECINVD+
Sbjct: 266 TKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDY 325

Query: 721 KSVRKESFHDIQLDVKGCRDVYASFDKYVEVEHL 822
           KS RKESF+D+QLDVKGCRDVYASFDKYVEVE L
Sbjct: 326 KSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL 359


>ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata]
           gi|297319106|gb|EFH49528.1| ubiquitin-specific protease
           12 [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  393 bits (1010), Expect = e-107
 Identities = 193/274 (70%), Positives = 218/274 (79%)
 Frame = +1

Query: 1   DALSLPYGWTSRAQFRMSVINHIDPKYNVKKDAEHIFQARESDWGFTSFMPLNELXXXXX 180
           DA SLPYGW+  AQF ++V+N I  +Y ++K+ +H F ARESDWGFTSFMPL+EL     
Sbjct: 106 DAASLPYGWSRYAQFSLAVVNQIHSRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSR 165

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEADVAVRKVIDYRGYDSKKMTGYVGLKNQG 360
                                        +EA+VAVRKV+DY  YDSKK TG+VGLKNQG
Sbjct: 166 GYLVNDTVL--------------------VEAEVAVRKVLDYWSYDSKKETGFVGLKNQG 205

Query: 361 ATCYMNSLLQFLYHIPYFRKAVYHMPTTENEIPSASIPLALQTLFFKLQYHDTSVATKEL 540
           ATCYMNSLLQ LYHIPYFRKAVYHMPTTEN++P+ASIPLALQ+LF+KLQY+DTSVATKEL
Sbjct: 206 ATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPTASIPLALQSLFYKLQYNDTSVATKEL 265

Query: 541 TKSFGWETCDSLMQHDVQELNRVLSEKLEQKMKGTAVEGTIQKLFEGHHMNYIECINVDF 720
           TKSFGW+T DS MQHDVQELNRVL EKLE KMKGT VEGTIQ+LFEGHHMNYIECINVDF
Sbjct: 266 TKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDF 325

Query: 721 KSVRKESFHDIQLDVKGCRDVYASFDKYVEVEHL 822
           KS RKESF+D+QLDVKGC+DVYASFDKYVEVE L
Sbjct: 326 KSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 359


>gb|AAG42754.1|AF302663_1 ubiquitin-specific protease 12 [Arabidopsis thaliana]
          Length = 1116

 Score =  392 bits (1008), Expect = e-107
 Identities = 194/274 (70%), Positives = 217/274 (79%)
 Frame = +1

Query: 1   DALSLPYGWTSRAQFRMSVINHIDPKYNVKKDAEHIFQARESDWGFTSFMPLNELXXXXX 180
           DA SLPYGW+  AQF ++V+N I  +Y V+K+ +H F ARESDWGFTSFMPL+EL     
Sbjct: 106 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSR 165

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEADVAVRKVIDYRGYDSKKMTGYVGLKNQG 360
                                        +EA+VAVRKV+DY  YDSKK TG+VGLKNQG
Sbjct: 166 GYLVNDTVL--------------------VEAEVAVRKVLDYWSYDSKKETGFVGLKNQG 205

Query: 361 ATCYMNSLLQFLYHIPYFRKAVYHMPTTENEIPSASIPLALQTLFFKLQYHDTSVATKEL 540
           ATCYMNSLLQ LYHIPYFRKAVYHMPTTEN+ P+ASIPLALQ+LF+KLQY+DTSVATKEL
Sbjct: 206 ATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKEL 265

Query: 541 TKSFGWETCDSLMQHDVQELNRVLSEKLEQKMKGTAVEGTIQKLFEGHHMNYIECINVDF 720
           TKSFGW+T DS MQHDVQELNRVL EKLE KMKGT VEGTIQ+LFEGHHMNYIECINVDF
Sbjct: 266 TKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDF 325

Query: 721 KSVRKESFHDIQLDVKGCRDVYASFDKYVEVEHL 822
           KS RKESF+D+QLDVKGC+DVYASFDKYVEVE L
Sbjct: 326 KSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 359


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