BLASTX nr result

ID: Cnidium21_contig00017606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017606
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28269.3| unnamed protein product [Vitis vinifera]              219   1e-55
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   219   1e-55
ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [G...   219   2e-55
ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   213   2e-53
ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [G...   212   3e-53

>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  219 bits (559), Expect = 1e-55
 Identities = 119/169 (70%), Positives = 132/169 (78%), Gaps = 2/169 (1%)
 Frame = +2

Query: 14  SHQIKRKYEGPEFEGDYNKQNPNPGFTEVVSSPFQRPASKKVGKAQKVPRIAKNQTAS-- 187
           S Q+KRK E P++E + ++    PGFTEVV+SP Q P S K GKAQK  RI K   +   
Sbjct: 46  SPQLKRKSE-PDYEAESSEWTAVPGFTEVVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQ 104

Query: 188 TPVSGVGSLSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRR 367
           TPVS  GS   NNLTP GPCRYDSSLGLLTKKFINLIK AEDGILDLNKAADTLEVQKRR
Sbjct: 105 TPVSNAGS-PGNNLTPVGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRR 163

Query: 368 IYDITNVLEGTGLIEKKLKNRIQWKGLDAAIPRDIDETVGSLQADVEHL 514
           IYDITNVLEG GLIEKKLKNRIQWKGLD + P ++DE V SLQ +VE+L
Sbjct: 164 IYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDENVTSLQEEVENL 212


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  219 bits (559), Expect = 1e-55
 Identities = 119/169 (70%), Positives = 132/169 (78%), Gaps = 2/169 (1%)
 Frame = +2

Query: 14  SHQIKRKYEGPEFEGDYNKQNPNPGFTEVVSSPFQRPASKKVGKAQKVPRIAKNQTAS-- 187
           S Q+KRK E P++E + ++    PGFTEVV+SP Q P S K GKAQK  RI K   +   
Sbjct: 57  SPQLKRKSE-PDYEAESSEWTAVPGFTEVVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQ 115

Query: 188 TPVSGVGSLSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRR 367
           TPVS  GS   NNLTP GPCRYDSSLGLLTKKFINLIK AEDGILDLNKAADTLEVQKRR
Sbjct: 116 TPVSNAGS-PGNNLTPVGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRR 174

Query: 368 IYDITNVLEGTGLIEKKLKNRIQWKGLDAAIPRDIDETVGSLQADVEHL 514
           IYDITNVLEG GLIEKKLKNRIQWKGLD + P ++DE V SLQ +VE+L
Sbjct: 175 IYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDENVTSLQEEVENL 223


>ref|XP_003538095.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 435

 Score =  219 bits (558), Expect = 2e-55
 Identities = 116/167 (69%), Positives = 128/167 (76%), Gaps = 2/167 (1%)
 Frame = +2

Query: 20  QIKRKYEGPEFEGDYNKQNPNPGFTEVVSSPFQRPASKKVGKAQKVPRIAKNQT--ASTP 193
           Q+KRK E  +FE D +     PGFTE  +SPFQ P S K GK  K  R+ K       TP
Sbjct: 41  QLKRKSEAADFEAD-SGDRMTPGFTEAANSPFQTPVSGKTGKGGKSFRLTKGNRLGTQTP 99

Query: 194 VSGVGSLSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIY 373
            S +GS S NNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIY
Sbjct: 100 GSNIGSPSGNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIY 159

Query: 374 DITNVLEGTGLIEKKLKNRIQWKGLDAAIPRDIDETVGSLQADVEHL 514
           DITNVLEG GLIEKKLKNRIQWKGLD + P + D++  SLQA+VE+L
Sbjct: 160 DITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDSFPSLQAEVENL 206


>ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score =  213 bits (541), Expect = 2e-53
 Identities = 115/169 (68%), Positives = 129/169 (76%), Gaps = 2/169 (1%)
 Frame = +2

Query: 14  SHQIKRKYEGPEFEGDYNKQNPNPGFTEVVSSPFQRPASKKVGKAQKVPRIAKNQTAS-- 187
           S Q+KRK E  ++E +   +   P F EVV+SP Q PAS K GK  K  R+ K   +   
Sbjct: 61  SPQLKRKSEVADYEAESTDRAIGPRFXEVVNSPHQTPASVKGGKGSK-SRLTKCSRSGPQ 119

Query: 188 TPVSGVGSLSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRR 367
           TP+S VGS S NNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRR
Sbjct: 120 TPMSNVGSPSTNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRR 179

Query: 368 IYDITNVLEGTGLIEKKLKNRIQWKGLDAAIPRDIDETVGSLQADVEHL 514
           IYDITNVLEG GLIEKKLKNRIQWKGLD +   D+D+    LQA+VE+L
Sbjct: 180 IYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYADLQAEVENL 228


>ref|XP_003539844.1| PREDICTED: transcription factor E2FB-like [Glycine max]
          Length = 450

 Score =  212 bits (539), Expect = 3e-53
 Identities = 112/166 (67%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
 Frame = +2

Query: 23  IKRKYEGPEFEGDYNKQNPNPGFTEVVSSPFQRPASKKVGKAQKVPRIAKNQTAST--PV 196
           +KRK E  +FE D +      GFTE  +SPFQ P S K GK  K  R+ K     T  P 
Sbjct: 55  LKRKSEVADFEAD-SGDRMTAGFTEAANSPFQTPVSGKTGKGGKSSRLTKGNRVGTQTPG 113

Query: 197 SGVGSLSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYD 376
           S +GS + +NLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYD
Sbjct: 114 SNIGSPAGSNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYD 173

Query: 377 ITNVLEGTGLIEKKLKNRIQWKGLDAAIPRDIDETVGSLQADVEHL 514
           ITNVLEG GLIEKKLKNRIQWKGLD + P + D++  SLQA+VE+L
Sbjct: 174 ITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDSFASLQAEVENL 219


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