BLASTX nr result

ID: Cnidium21_contig00017578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017578
         (1669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26594.3| unnamed protein product [Vitis vinifera]              691   0.0  
ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containi...   683   0.0  
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   682   0.0  
ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containi...   651   0.0  
ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|2...   637   e-180

>emb|CBI26594.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  691 bits (1783), Expect = 0.0
 Identities = 342/524 (65%), Positives = 425/524 (81%), Gaps = 12/524 (2%)
 Frame = +2

Query: 17   MFLRRIRTTLAAVRHFSGEV-TVEPIS--KPVIIQPASTAVK---------SGGGDTLGR 160
            MF +R+ T LAAVRHFS EV T++P++  KP+ I      VK         S G DTLGR
Sbjct: 1    MFRQRVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGR 60

Query: 161  RLLSLVYTKRSAVITLRKWKEEGHVIRKYELNRNVRMLRKLKRYKHALEICEWMKTQDDM 340
            RLLSLVY KRSAVI +++W+EEGH +RKYELNR VR LRKLKRYKHALEICEWM  Q D+
Sbjct: 61   RLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDI 120

Query: 341  QLMEGDYAVHLDLISKVRGLNSAEKFFEDLPDQMRGQLACSSLLHNYVQNKDSSKAEALM 520
            +L+ GDYAVHLDLI+K+RGL SAEKFFEDL D+M+GQ  C++LLH YVQNK S KAEALM
Sbjct: 121  KLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALM 180

Query: 521  EKMLECGFLKNPLPYNHMISLYISNGQLEEALRMIKKLKKNTLPDLLTYNLWLRICGSLD 700
            EKM ECGFLK PLPYNHMISLYIS+GQLE+   MI++LKKNT PD++TYNLWL +C S +
Sbjct: 181  EKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQN 240

Query: 701  DIDIAENVFLELKKAKVEPDWVTYSTLTNIYIKNSLHEKAAASLKEMEKKTSRKERTAYA 880
            D++ AE V LE+KKAK++PDWVTYS+LTN+YIK  L +KAA +L EMEK+TSRK R AY+
Sbjct: 241  DVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYS 300

Query: 881  SIISLHTRLGNKGEIRRIWKKMKSTYRKLNDGEYTSMINSLLKLEEFEEAHKLFNEWESV 1060
            S+ISLHT + +K  + RIWKK+KS + K+ND EYT MI+SL+KL EFEEA  L++EW SV
Sbjct: 301  SLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSV 360

Query: 1061 SPTKDCRIPNLFVAAYVNKNQMEMAEDFHKQMMKKGITPSCTTWELLTWGYLKQNDMEKA 1240
            SPT D R+PN+ +AAY+NKN+MEMAE F+ QM+++GITPS TTWELLTWGYLK+  MEK 
Sbjct: 361  SPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKV 420

Query: 1241 LISFQKAVGSVKKWDFNEKLVQELYRIIQGHKNIERAEQLLVILRHGGELNTKIYNALLK 1420
            L  F+KAVGSVKKW+ +EKLV+E+Y+ ++   NIE AE++LVILR  G ++T+IYN LL+
Sbjct: 421  LDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLR 480

Query: 1421 TYAEAGKVPLVISERMKKDKVELDDETRELIKLTSKMCVSDVSS 1552
             YA+AGK+PL+++E MKKDKVE+D+ET  LIK TSKMCVS+VSS
Sbjct: 481  AYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCVSEVSS 524


>ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  683 bits (1763), Expect = 0.0
 Identities = 339/519 (65%), Positives = 421/519 (81%), Gaps = 12/519 (2%)
 Frame = +2

Query: 32   IRTTLAAVRHFSGEV-TVEPIS--KPVIIQPASTAVK---------SGGGDTLGRRLLSL 175
            I + LAAVRHFS EV T++P++  KP+ I      VK         S G DTLGRRLLSL
Sbjct: 119  ILSALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGRRLLSL 178

Query: 176  VYTKRSAVITLRKWKEEGHVIRKYELNRNVRMLRKLKRYKHALEICEWMKTQDDMQLMEG 355
            VY KRSAVI +++W+EEGH +RKYELNR VR LRKLKRYKHALEICEWM  Q D++L+ G
Sbjct: 179  VYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAG 238

Query: 356  DYAVHLDLISKVRGLNSAEKFFEDLPDQMRGQLACSSLLHNYVQNKDSSKAEALMEKMLE 535
            DYAVHLDLI+K+RGL SAEKFFEDL D+M+GQ  C++LLH YVQNK S KAEALMEKM E
Sbjct: 239  DYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSE 298

Query: 536  CGFLKNPLPYNHMISLYISNGQLEEALRMIKKLKKNTLPDLLTYNLWLRICGSLDDIDIA 715
            CGFLK PLPYNHMISLYIS+GQLE+   MI++LKKNT PD++TYNLWL +C S +D++ A
Sbjct: 299  CGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETA 358

Query: 716  ENVFLELKKAKVEPDWVTYSTLTNIYIKNSLHEKAAASLKEMEKKTSRKERTAYASIISL 895
            E V LE+KKAK++PDWVTYS+LTN+YIK  L +KAA +L EMEK+TSRK R AY+S+ISL
Sbjct: 359  EKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISL 418

Query: 896  HTRLGNKGEIRRIWKKMKSTYRKLNDGEYTSMINSLLKLEEFEEAHKLFNEWESVSPTKD 1075
            HT + +K  + RIWKK+KS + K+ND EYT MI+SL+KL EFEEA  L++EW SVSPT D
Sbjct: 419  HTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGD 478

Query: 1076 CRIPNLFVAAYVNKNQMEMAEDFHKQMMKKGITPSCTTWELLTWGYLKQNDMEKALISFQ 1255
             R+PN+ +AAY+NKN+MEMAE F+ QM+++GITPS TTWELLTWGYLK+  MEK L  F+
Sbjct: 479  SRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFE 538

Query: 1256 KAVGSVKKWDFNEKLVQELYRIIQGHKNIERAEQLLVILRHGGELNTKIYNALLKTYAEA 1435
            KAVGSVKKW+ +EKLV+E+Y+ ++   NIE AE++LVILR  G ++T+IYN LL+ YA+A
Sbjct: 539  KAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKA 598

Query: 1436 GKVPLVISERMKKDKVELDDETRELIKLTSKMCVSDVSS 1552
            GK+PL+++E MKKDKVE+D+ET  LIK TSKMCVS+VSS
Sbjct: 599  GKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCVSEVSS 637


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  682 bits (1761), Expect = 0.0
 Identities = 337/518 (65%), Positives = 419/518 (80%), Gaps = 12/518 (2%)
 Frame = +2

Query: 17   MFLRRIRTTLAAVRHFSGEV-TVEPIS--KPVIIQPASTAVK---------SGGGDTLGR 160
            MF +R+ T LAAVRHFS EV T++P++  KP+ I      VK         S G DTLGR
Sbjct: 1    MFRQRVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGR 60

Query: 161  RLLSLVYTKRSAVITLRKWKEEGHVIRKYELNRNVRMLRKLKRYKHALEICEWMKTQDDM 340
            RLLSLVY KRSAVI +++W+EEGH +RKYELNR VR LRKLKRYKHALEICEWM  Q D+
Sbjct: 61   RLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDI 120

Query: 341  QLMEGDYAVHLDLISKVRGLNSAEKFFEDLPDQMRGQLACSSLLHNYVQNKDSSKAEALM 520
            +L+ GDYAVHLDLI+K+RGL SAEKFFEDL D+M+GQ  C++LLH YVQNK S KAEALM
Sbjct: 121  KLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALM 180

Query: 521  EKMLECGFLKNPLPYNHMISLYISNGQLEEALRMIKKLKKNTLPDLLTYNLWLRICGSLD 700
            EKM ECGFLK PLPYNHMISLYIS+GQLE+   MI++LKKNT PD++TYNLWL +C S +
Sbjct: 181  EKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQN 240

Query: 701  DIDIAENVFLELKKAKVEPDWVTYSTLTNIYIKNSLHEKAAASLKEMEKKTSRKERTAYA 880
            D++ AE V LE+KKAK++PDWVTYS+LTN+YIK  L +KAA +L EMEK+TSRK R AY+
Sbjct: 241  DVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYS 300

Query: 881  SIISLHTRLGNKGEIRRIWKKMKSTYRKLNDGEYTSMINSLLKLEEFEEAHKLFNEWESV 1060
            S+ISLHT + +K  + RIWKK+KS + K+ND EYT MI+SL+KL EFEEA  L++EW SV
Sbjct: 301  SLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSV 360

Query: 1061 SPTKDCRIPNLFVAAYVNKNQMEMAEDFHKQMMKKGITPSCTTWELLTWGYLKQNDMEKA 1240
            SPT D R+PN+ +AAY+NKN+MEMAE F+ QM+++GITPS TTWELLTWGYLK+  MEK 
Sbjct: 361  SPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKV 420

Query: 1241 LISFQKAVGSVKKWDFNEKLVQELYRIIQGHKNIERAEQLLVILRHGGELNTKIYNALLK 1420
            L  F+KAVGSVKKW+ +EKLV+E+Y+ ++   NIE AE++LVILR  G ++T+IYN LL+
Sbjct: 421  LDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLR 480

Query: 1421 TYAEAGKVPLVISERMKKDKVELDDETRELIKLTSKMC 1534
             YA+AGK+PL+++E MKKDKVE+D+ET  LIK TSKMC
Sbjct: 481  AYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMC 518


>ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Glycine max]
          Length = 516

 Score =  651 bits (1679), Expect = 0.0
 Identities = 321/520 (61%), Positives = 402/520 (77%), Gaps = 1/520 (0%)
 Frame = +2

Query: 5    KSTQMFLRRIRTTLAAVRHFSGEVTVEPISKPVIIQPASTAVKSGGGDTLGRRLLSLVYT 184
            + T   LR + T LA VRHFS        S        + A  SGGGDTLGRRLLSLVY 
Sbjct: 5    RKTDTLLRSVGTYLAVVRHFSASAEARVGS--------AAASSSGGGDTLGRRLLSLVYP 56

Query: 185  KRSAVITLRKWKEEGHVI-RKYELNRNVRMLRKLKRYKHALEICEWMKTQDDMQLMEGDY 361
            KRSAV+ + KWKEEGH   RKY+LNR VR LRK KRYKHALE+CEWM  Q DM+L++GDY
Sbjct: 57   KRSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDY 116

Query: 362  AVHLDLISKVRGLNSAEKFFEDLPDQMRGQLACSSLLHNYVQNKDSSKAEALMEKMLECG 541
            AVHLDLI+KVRGLNSAEKFFEDLPD+MRG+  CS+LLH YVQN    KAEALM KM EC 
Sbjct: 117  AVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECD 176

Query: 542  FLKNPLPYNHMISLYISNGQLEEALRMIKKLKKNTLPDLLTYNLWLRICGSLDDIDIAEN 721
             L NPLPYNHMISLYISNG+LE+  ++I++LK NT PD++T+NLWL  C S +D++ AE 
Sbjct: 177  LLINPLPYNHMISLYISNGKLEKVPKIIQELKMNTSPDIVTFNLWLAACASQNDVETAER 236

Query: 722  VFLELKKAKVEPDWVTYSTLTNIYIKNSLHEKAAASLKEMEKKTSRKERTAYASIISLHT 901
            V LELKKAK++PDWVTYSTLTN+YIKN+  EKA A++KEME +TSRK R AY+S++SLHT
Sbjct: 237  VLLELKKAKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHT 296

Query: 902  RLGNKGEIRRIWKKMKSTYRKLNDGEYTSMINSLLKLEEFEEAHKLFNEWESVSPTKDCR 1081
             +GNK ++ RIW+KMK+++RK+ND EY  MI+SLLKL +F  A  L+ EWESVS T D R
Sbjct: 297  NMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVR 356

Query: 1082 IPNLFVAAYVNKNQMEMAEDFHKQMMKKGITPSCTTWELLTWGYLKQNDMEKALISFQKA 1261
            + N+ + +Y+N++QMEMAEDF  Q+++KG+ P  TTWEL TWGYLK+ D+EK L  F KA
Sbjct: 357  VSNILLGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYFSKA 416

Query: 1262 VGSVKKWDFNEKLVQELYRIIQGHKNIERAEQLLVILRHGGELNTKIYNALLKTYAEAGK 1441
            + SV KW  +++LVQE ++II+   + + AEQLLVILR+ G +NT IYN  LKTYA AGK
Sbjct: 417  ISSVTKWSPDQRLVQEAFKIIEEQAHTKGAEQLLVILRNAGHVNTNIYNLFLKTYATAGK 476

Query: 1442 VPLVISERMKKDKVELDDETRELIKLTSKMCVSDVSSYLT 1561
            +P++++ERM+KD V+LD+ETR L+ LTSKMCVSDVS  L+
Sbjct: 477  MPMIVAERMRKDNVKLDEETRRLLDLTSKMCVSDVSRILS 516


>ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|222857027|gb|EEE94574.1|
            predicted protein [Populus trichocarpa]
          Length = 513

 Score =  637 bits (1644), Expect = e-180
 Identities = 313/513 (61%), Positives = 403/513 (78%), Gaps = 1/513 (0%)
 Frame = +2

Query: 17   MFLRRIRTTLAAV-RHFSGEVTVEPISKPVIIQPASTAVKSGGGDTLGRRLLSLVYTKRS 193
            M +R +R TLAA  R FS     E   K ++        KSGGGDTLGRRL SLVY KRS
Sbjct: 1    MLVRNVRGTLAAAARQFSAAAVTE---KGIV--SGGEGKKSGGGDTLGRRLFSLVYGKRS 55

Query: 194  AVITLRKWKEEGHVIRKYELNRNVRMLRKLKRYKHALEICEWMKTQDDMQLMEGDYAVHL 373
            AVIT+RKWKEEGH +RKYELNR VR LRKLKRYKHALE+CEWM  Q D++L+ GDYAVHL
Sbjct: 56   AVITIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVHL 115

Query: 374  DLISKVRGLNSAEKFFEDLPDQMRGQLACSSLLHNYVQNKDSSKAEALMEKMLECGFLKN 553
            DLI+K+RGLNSAEKFFED+PD+MR   ACS+LLH YVQNK  SKAEALMEKM ECGFLKN
Sbjct: 116  DLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKN 175

Query: 554  PLPYNHMISLYISNGQLEEALRMIKKLKKNTLPDLLTYNLWLRICGSLDDIDIAENVFLE 733
             LPYNHM+S+Y++NGQLE+   +I++LKK T PD++TYN+WL  C S +D++ AE VF+E
Sbjct: 176  ALPYNHMLSVYVANGQLEKVAEIIQELKKKTSPDVVTYNMWLTACASQNDVETAEKVFME 235

Query: 734  LKKAKVEPDWVTYSTLTNIYIKNSLHEKAAASLKEMEKKTSRKERTAYASIISLHTRLGN 913
            LKK+K++PDWVTYSTLTN+YIK    EKAA +LKE+EK+ S+K R  Y+S++SLH  + +
Sbjct: 236  LKKSKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTYSSLLSLHANMKD 295

Query: 914  KGEIRRIWKKMKSTYRKLNDGEYTSMINSLLKLEEFEEAHKLFNEWESVSPTKDCRIPNL 1093
            K  + R W KMKS + K+ND EY  MI+SL+KL EF  A  L+NEWESVS T+D R+ N+
Sbjct: 296  KDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSRVSNI 355

Query: 1094 FVAAYVNKNQMEMAEDFHKQMMKKGITPSCTTWELLTWGYLKQNDMEKALISFQKAVGSV 1273
             +A+Y+N+NQME AE+F ++M++KGITP  TTWELLT G+LK   MEK L +F+KA+ SV
Sbjct: 356  VLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKKALCSV 415

Query: 1274 KKWDFNEKLVQELYRIIQGHKNIERAEQLLVILRHGGELNTKIYNALLKTYAEAGKVPLV 1453
            +KW  +++L+ ++++ ++   +IE AE+LLVILR  G ++T IYN+LL+TYA+AGK+P++
Sbjct: 416  RKWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHVSTMIYNSLLRTYAKAGKMPVI 475

Query: 1454 ISERMKKDKVELDDETRELIKLTSKMCVSDVSS 1552
            I ERM+KD VELDDET +LI+ TS MCVS+VSS
Sbjct: 476  IEERMQKDNVELDDETHKLIQTTSTMCVSEVSS 508


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