BLASTX nr result

ID: Cnidium21_contig00017547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017547
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...    82   6e-14
ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatu...    78   7e-13
dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]              78   7e-13
dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]              78   7e-13
ref|XP_002881161.1| tRNA synthetase class I (C) family protein [...    78   9e-13

>ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
          Length = 571

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = -3

Query: 161 NGGERKGENGKLRELWLYNTMSKQKELFKSKVQGQVGMYVCGVTAYDFSHIGH 3
           +GGE  G   +  ELWLYNTMS+QKE+FK KV G+VGMYVCGVTAYD SHIGH
Sbjct: 63  SGGE--GVENRRAELWLYNTMSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGH 113


>ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
           gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase
           [Medicago truncatula]
          Length = 608

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = -3

Query: 161 NGGERKGENGKLRELWLYNTMSKQKELFKSKVQGQVGMYVCGVTAYDFSHIGH 3
           +GGE         E+WL+NTMSK+KELFK KV+ +VGMYVCGVTAYD SHIGH
Sbjct: 62  DGGENSRSKSPSPEVWLHNTMSKKKELFKPKVEKKVGMYVCGVTAYDLSHIGH 114


>dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -3

Query: 125 RELWLYNTMSKQKELFKSKVQGQVGMYVCGVTAYDFSHIGH 3
           ++LW+YNTMS++KE+FK KV G+VGMYVCGVTAYDFSHIGH
Sbjct: 82  KDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGH 122


>dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -3

Query: 125 RELWLYNTMSKQKELFKSKVQGQVGMYVCGVTAYDFSHIGH 3
           ++LW+YNTMS++KE+FK KV G+VGMYVCGVTAYDFSHIGH
Sbjct: 82  KDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGH 122


>ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327000|gb|EFH57420.1| tRNA
           synthetase class I (C) family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 562

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/78 (51%), Positives = 51/78 (65%)
 Frame = -3

Query: 236 KSTAKIHCSSSLSDVQSESRTGLCCNGGERKGENGKLRELWLYNTMSKQKELFKSKVQGQ 57
           K T    C ++LS +      G   +GG         +ELWL+NTMS++KELFK K++G+
Sbjct: 38  KETQSRRCFTTLSSLTDG---GAPISGG---------KELWLHNTMSRKKELFKPKIEGK 85

Query: 56  VGMYVCGVTAYDFSHIGH 3
           VGMYVCGVTAYD SHIGH
Sbjct: 86  VGMYVCGVTAYDLSHIGH 103


Top