BLASTX nr result

ID: Cnidium21_contig00017527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017527
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFR34340.1| hypothetical protein GlmaxMp14 (mitochondrion) [G...   216   1e-53
ref|NP_064005.1| orf152 gene product (mitochondrion) [Beta vulga...   172   1e-40
ref|XP_002538339.1| conserved hypothetical protein [Ricinus comm...   103   9e-20
ref|XP_002335631.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-08
emb|CBI23504.3| unnamed protein product [Vitis vinifera]               64   8e-08

>gb|AFR34340.1| hypothetical protein GlmaxMp14 (mitochondrion) [Glycine max]
          Length = 202

 Score =  216 bits (549), Expect = 1e-53
 Identities = 132/217 (60%), Positives = 141/217 (64%), Gaps = 22/217 (10%)
 Frame = -1

Query: 1051 WDI*RSAGLEPYGLVS-----ISLDGWCPSR*-----LIVDSTLISCLSWRALPPS---- 914
            WDI RSAGLE   +       I    W  SR      +IVDSTLISCLSWRAL PS    
Sbjct: 4    WDIRRSAGLERNPIQGAFPQPIYTRCWSRSRLAVPLSMIVDSTLISCLSWRALHPSSQVI 63

Query: 913  --------IESSNSLSEIFPPPIXXXXXXXXXXXXXXXXSRFAIKRGKSLYFRLGRSRHS 758
                    +  ++  SE  P                   SRFAIKRGKSL FRLGRSRHS
Sbjct: 64   RYRKDCRRVSHASCFSESVPS---------------VSQSRFAIKRGKSLDFRLGRSRHS 108

Query: 757  RNSPVHRLITRVRIQSAHSE*KKRSSWIIFLNQN*YQLIPIHSVKVSTALSHPSTKRCTM 578
             NSPVHR ITR   Q AHSE KKRSSWI+FLNQN Y+LIPIHSVKVST    PST+RCTM
Sbjct: 109  CNSPVHRSITRASSQHAHSERKKRSSWILFLNQNVYKLIPIHSVKVSTG---PSTERCTM 165

Query: 577  LIGIGKDLLVHVLEGSIHGNHHYFLPRAWYGFVLGVV 467
            LIGIGKDLLVHVLEGSIHGN + FLPRAWYGFVLGVV
Sbjct: 166  LIGIGKDLLVHVLEGSIHGNQNVFLPRAWYGFVLGVV 202


>ref|NP_064005.1| orf152 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435150|ref|YP_004222368.1| hypothetical protein
           BevumaM_p135 [Beta vulgaris subsp. maritima]
           gi|346683241|ref|YP_004842173.1| hypothetical protein
           BemaM_p129 [Beta macrocarpa] gi|9049307|dbj|BAA99317.1|
           orf152 [Beta vulgaris subsp. vulgaris]
           gi|54606701|dbj|BAD66724.1| orf152 [Beta vulgaris subsp.
           vulgaris] gi|54606745|dbj|BAD66768.1| orf152 [Beta
           vulgaris subsp. vulgaris] gi|317905600|emb|CBJ14007.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|319439883|emb|CBJ17583.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|320148037|emb|CBJ20701.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500159|emb|CBX24978.1| hypothetical protein [Beta
           macrocarpa] gi|384977915|emb|CBL54139.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 152

 Score =  172 bits (437), Expect = 1e-40
 Identities = 101/167 (60%), Positives = 111/167 (66%), Gaps = 14/167 (8%)
 Frame = -1

Query: 970 LIVDSTLISCLSW-------------RALPPSIESSNSLSEIFPPPIXXXXXXXXXXXXX 830
           +IVDSTLIS LSW             R L   +  ++  SE+ P                
Sbjct: 1   MIVDSTLISSLSWVPNLHPSSQVIRYRKLFRRLSHASCFSELVPS--------------- 45

Query: 829 XXXSRFAIKRGKSLYFRLGRSRHSRNSPVHRLITRVRIQSAHSE*KKRSSWIIFLNQN*Y 650
              SRF I RGKSLYFRLGRSRHSRN  VHR I RVRIQSAHSE KKRSSWI+FL +N Y
Sbjct: 46  VSQSRFTITRGKSLYFRLGRSRHSRNFLVHRSIARVRIQSAHSERKKRSSWILFLKKNVY 105

Query: 649 -QLIPIHSVKVSTALSHPSTKRCTMLIGIGKDLLVHVLEGSIHGNHH 512
              +PIHSVKVSTA S PST+RCTMLIGIGKDLL+HVLEGSIHGNHH
Sbjct: 106 HDSMPIHSVKVSTAFSRPSTERCTMLIGIGKDLLLHVLEGSIHGNHH 152


>ref|XP_002538339.1| conserved hypothetical protein [Ricinus communis]
           gi|223512664|gb|EEF24045.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 153

 Score =  103 bits (257), Expect = 9e-20
 Identities = 84/198 (42%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
 Frame = +2

Query: 20  TNQKCKSRKRSRETDRSATTRT---GVLSGSYHSCSGARTRNSRRGHQPPESL*QPPLYS 190
           TNQKCKSRKRSR+TDRSATTRT    VLS SYHSCSG   + S+       ++  PPL  
Sbjct: 4   TNQKCKSRKRSRKTDRSATTRTRVGEVLSMSYHSCSGKDPQLSKGPPTARITVANPPLTQ 63

Query: 191 TDSAYSLSIXXXXXXXXXXXXXXXVFIEEALHLK*D*CRSRRLGLGFRKDEDAR-GKDKV 367
             +    S                              R R      R D D+R GK   
Sbjct: 64  WIALILSSFNQQNEGRKK--------------------RKRERARPLRADGDSRTGKSG- 102

Query: 368 F*TTNLA*GF*LTHLKQMEIPGRGKVALGIYLLNNTKNKAIPCPREKVVMIAMNAALEDV 547
             T +L     L + K   IP                      PR+KVVMIAMNAALEDV
Sbjct: 103 --TRHL-----LNNTKNKAIP---------------------YPRDKVVMIAMNAALEDV 134

Query: 548 YKKVFADSYQHGAPLSRG 601
           YKKVFADSYQHGAPLSRG
Sbjct: 135 YKKVFADSYQHGAPLSRG 152


>ref|XP_002335631.1| predicted protein [Populus trichocarpa] gi|222834451|gb|EEE72928.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 47/89 (52%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
 Frame = +2

Query: 35  KSRKRSRETDRSATTRT---GVLSGSYHSCSGARTRNSRRGHQPPESL*QPPLYSTDSAY 205
           KSRKR RETDRSATTRT   GVLS SYHSCSG   + S+    P     +  LYS   AY
Sbjct: 9   KSRKRRRETDRSATTRTRVGGVLSMSYHSCSGKDPQLSK--GPPTARCSKSSLYSMYRAY 66

Query: 206 SLSIXXXXXXXXXXXXXXXVFIEEALHLK 292
            LSI               VFIEEALHLK
Sbjct: 67  PLSI-----KGEKKEREKEVFIEEALHLK 90


>emb|CBI23504.3| unnamed protein product [Vitis vinifera]
          Length = 103

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = -3

Query: 512 LLSPEGMVWLCSWCCLIDRCRVPLFPVRESPSALSG*ARILMPGWLFKRLYLYPLHLHLF 333
           L  P        +  L +RCRVPLFPVRESPSALSG ARILM GWLFK  +++ L + +F
Sbjct: 43  LFLPRAWYGFALFLVLFNRCRVPLFPVRESPSALSGRARILMSGWLFK--FIFTLCIFIF 100


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