BLASTX nr result

ID: Cnidium21_contig00017470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017470
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 1...   227   9e-58
emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]   227   9e-58
ref|XP_002872992.1| armadillo/beta-catenin repeat family protein...   218   4e-55
ref|NP_195803.1| U-box domain-containing protein 16 [Arabidopsis...   217   9e-55

>ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|222854223|gb|EEE91770.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  229 bits (584), Expect = 2e-58
 Identities = 118/177 (66%), Positives = 145/177 (81%), Gaps = 4/177 (2%)
 Frame = -3

Query: 522 RALAKTDSDNRACIAEAGGLPLLVKFLG----SDHPNLQVNAVTTILNLSILEANKMMIM 355
           RALAK++SD+RACIAEAG +P+L ++LG    S+ PNLQVNAVT +LNLSILEANK  I+
Sbjct: 392 RALAKSNSDSRACIAEAGAIPVLARYLGPDIGSEFPNLQVNAVTAMLNLSILEANKTKII 451

Query: 354 ETDGVLNGIIEVLRSGATWEAKGNAAATIFSLTGIHAYRRKLGRKTRVVKGLIDLAKAGP 175
           E    LNG+IEVLR+GATWEAKGNAAATIFSL+G+H+YR++LGRKTRVVKGL+DLAK+GP
Sbjct: 452 ENGRALNGVIEVLRTGATWEAKGNAAATIFSLSGVHSYRKRLGRKTRVVKGLVDLAKSGP 511

Query: 174 TSSKKDALVAILNLAGDRXXXXXXXXXXXXXXXXEIIDGLPEEAAAILELVVKKGGL 4
            SSK+DALVAILNLAGDR                E+I+ +PEEAAA+LE+VVK+GG+
Sbjct: 512 ASSKRDALVAILNLAGDRETVGRLVKEGVVDMVNEVINEMPEEAAAVLEMVVKRGGI 568


>ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 16 [Vitis vinifera]
          Length = 677

 Score =  227 bits (578), Expect = 9e-58
 Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 3/176 (1%)
 Frame = -3

Query: 522 RALAKTDSDNRACIAEAGGLPLLVKFLGSDHPNLQVNAVTTILNLSILEANKMMIMETDG 343
           R LAKTDS++RACIAEAG +PLLV+FLGSD+P+LQVNAVTT+LNLSILEANK  IME DG
Sbjct: 392 RVLAKTDSESRACIAEAGAIPLLVRFLGSDNPSLQVNAVTTLLNLSILEANKTRIMEIDG 451

Query: 342 VLNGIIEVLRSGATWEAKGNAAATIFSLTGIHAYRRKLGRKTRVVKGLIDLAKAGPTSSK 163
            LNG+IEVLRSGATWEAKGNAAATIFSL G+ +YR++LG+KTRV+KGL+DLAK GP SS+
Sbjct: 452 ALNGVIEVLRSGATWEAKGNAAATIFSLAGVQSYRKRLGKKTRVIKGLMDLAKGGPASSR 511

Query: 162 KDALVAILNLAGDRXXXXXXXXXXXXXXXXEIIDGLP---EEAAAILELVVKKGGL 4
           +DALVAIL+LAG+R                E++   P   EEA  +LE+VV++GGL
Sbjct: 512 RDALVAILSLAGERDTVGRLIEGGVVEMVIEVMAASPEEAEEAVTVLEVVVRRGGL 567


>emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]
          Length = 677

 Score =  227 bits (578), Expect = 9e-58
 Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 3/176 (1%)
 Frame = -3

Query: 522 RALAKTDSDNRACIAEAGGLPLLVKFLGSDHPNLQVNAVTTILNLSILEANKMMIMETDG 343
           R LAKTDS++RACIAEAG +PLLV+FLGSD+P+LQVNAVTT+LNLSILEANK  IME DG
Sbjct: 392 RVLAKTDSESRACIAEAGAIPLLVRFLGSDNPSLQVNAVTTLLNLSILEANKTRIMEIDG 451

Query: 342 VLNGIIEVLRSGATWEAKGNAAATIFSLTGIHAYRRKLGRKTRVVKGLIDLAKAGPTSSK 163
            LNG+IEVLRSGATWEAKGNAAATIFSL G+ +YR++LG+KTRV+KGL+DLAK GP SS+
Sbjct: 452 ALNGVIEVLRSGATWEAKGNAAATIFSLAGVQSYRKRLGKKTRVIKGLMDLAKGGPASSR 511

Query: 162 KDALVAILNLAGDRXXXXXXXXXXXXXXXXEIIDGLP---EEAAAILELVVKKGGL 4
           +DALVAIL+LAG+R                E++   P   EEA  +LE+VV++GGL
Sbjct: 512 RDALVAILSLAGERDTVGRLIEGGVVEMVIEVMAASPEEAEEAVTVLEVVVRRGGL 567


>ref|XP_002872992.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318829|gb|EFH49251.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 669

 Score =  218 bits (555), Expect = 4e-55
 Identities = 113/173 (65%), Positives = 133/173 (76%)
 Frame = -3

Query: 522 RALAKTDSDNRACIAEAGGLPLLVKFLGSDHPNLQVNAVTTILNLSILEANKMMIMETDG 343
           RALAK+D+  RACIAEAG +P LV+FL ++ P+LQ+NAVTTILNLSILE NK  IMETDG
Sbjct: 387 RALAKSDTVARACIAEAGAIPKLVRFLATECPSLQINAVTTILNLSILEQNKTRIMETDG 446

Query: 342 VLNGIIEVLRSGATWEAKGNAAATIFSLTGIHAYRRKLGRKTRVVKGLIDLAKAGPTSSK 163
            LNG+IEVLRSGATWEAK NAAAT+FSL G+ AYRR+LGRK RVV GL+DLAK GPTSSK
Sbjct: 447 ALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSK 506

Query: 162 KDALVAILNLAGDRXXXXXXXXXXXXXXXXEIIDGLPEEAAAILELVVKKGGL 4
           +DALVAILNL  +R                +    LPEEA A++E VV++GGL
Sbjct: 507 RDALVAILNLVAERENVGRFVEAGVMEAAGDAFQELPEEAVAVVEAVVRRGGL 559


>ref|NP_195803.1| U-box domain-containing protein 16 [Arabidopsis thaliana]
           gi|75264490|sp|Q9LZW3.1|PUB16_ARATH RecName: Full=U-box
           domain-containing protein 16; AltName: Full=Plant U-box
           protein 16 gi|7329656|emb|CAB82753.1| putative protein
           [Arabidopsis thaliana] gi|51536504|gb|AAU05490.1|
           At5g01830 [Arabidopsis thaliana]
           gi|52421307|gb|AAU45223.1| At5g01830 [Arabidopsis
           thaliana] gi|110738668|dbj|BAF01259.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332003015|gb|AED90398.1| U-box domain-containing
           protein 16 [Arabidopsis thaliana]
          Length = 674

 Score =  217 bits (552), Expect = 9e-55
 Identities = 112/173 (64%), Positives = 133/173 (76%)
 Frame = -3

Query: 522 RALAKTDSDNRACIAEAGGLPLLVKFLGSDHPNLQVNAVTTILNLSILEANKMMIMETDG 343
           RALAK+D+  RACIAEAG +P LV++L ++ P+LQ+NAVTTILNLSILE NK  IMETDG
Sbjct: 392 RALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDG 451

Query: 342 VLNGIIEVLRSGATWEAKGNAAATIFSLTGIHAYRRKLGRKTRVVKGLIDLAKAGPTSSK 163
            LNG+IEVLRSGATWEAK NAAAT+FSL G+ AYRR+LGRK RVV GL+DLAK GPTSSK
Sbjct: 452 ALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSK 511

Query: 162 KDALVAILNLAGDRXXXXXXXXXXXXXXXXEIIDGLPEEAAAILELVVKKGGL 4
           +DALVAILNL  +R                +    LPEEA A++E VV++GGL
Sbjct: 512 RDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAVAVVEAVVRRGGL 564


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