BLASTX nr result

ID: Cnidium21_contig00017466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017466
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_646371.1| hypothetical protein DDB_G0269878 [Dictyosteliu...    97   1e-17
ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    96   2e-17
ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    96   2e-17
ref|XP_002321930.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17
ref|XP_002318803.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17

>ref|XP_646371.1| hypothetical protein DDB_G0269878 [Dictyostelium discoideum AX4]
           gi|74858520|sp|Q55CW0.1|FBRL_DICDI RecName: Full=rRNA
           2'-O-methyltransferase fibrillarin
           gi|60474352|gb|EAL72289.1| hypothetical protein
           DDB_G0269878 [Dictyostelium discoideum AX4]
          Length = 334

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 60/146 (41%), Positives = 78/146 (53%), Gaps = 35/146 (23%)
 Frame = -2

Query: 455 VIVPHPRHEGVFMLDSKQ--LFTINMVPGEAVYGETLHSVQ------------------- 339
           ++  HPRHEGVF++  K+  L T+N VPGE+VYGE   SV                    
Sbjct: 98  IVEKHPRHEGVFIVRGKEESLATLNSVPGESVYGEKRVSVGEGEDKKEYRIWNPFRSKIA 157

Query: 338 ------------KPGTKVLYLGADSYTTVSHLSDIVGTSGMVYAVTSS--PCPHLENMKT 201
                       KPG+KVLY+GA S TT+SH+SDIVG +G+VY +  S  P   L  M  
Sbjct: 158 AGLHRGVDEIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAK 217

Query: 200 KRVNVVPVVGDVMHPTEYIKDIEPVD 123
           KR NV+P++ D  HP +Y   I  VD
Sbjct: 218 KRTNVIPIIEDARHPQKYRMLIGMVD 243


>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 68/155 (43%), Positives = 81/155 (52%), Gaps = 36/155 (23%)
 Frame = -2

Query: 464 SNGVIVPHPRHEGVFMLDSKQ--LFTINMVPGEAVYGETLHSVQ---------------- 339
           S  V+ PH RHEGVF+   K+  L T NMVPGEAVY E   SVQ                
Sbjct: 76  SRVVVEPH-RHEGVFIAKGKEDALVTKNMVPGEAVYNEKRISVQNEDGSKIEYRVWNPFR 134

Query: 338 ----------------KPGTKVLYLGADSYTTVSHLSDIVGTSGMVYAVTSS--PCPHLE 213
                           KPG +VLYLGA S TTVSH+SD+VG +G+VYAV  S      L 
Sbjct: 135 SKLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLV 194

Query: 212 NMKTKRVNVVPVVGDVMHPTEYIKDIEPVDGYIFS 108
           NM  KR NV+P++ D  HP +Y   +  VD  IFS
Sbjct: 195 NMAKKRTNVIPIIEDARHPAKYRMLVGMVD-VIFS 228


>ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 1
           [Vitis vinifera]
          Length = 311

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 68/155 (43%), Positives = 81/155 (52%), Gaps = 36/155 (23%)
 Frame = -2

Query: 464 SNGVIVPHPRHEGVFMLDSKQ--LFTINMVPGEAVYGETLHSVQ---------------- 339
           S  V+ PH RHEGVF+   K+  L T NMVPGEAVY E   SVQ                
Sbjct: 71  SRVVVEPH-RHEGVFIAKGKEDALVTKNMVPGEAVYNEKRISVQNEDGSKIEYRVWNPFR 129

Query: 338 ----------------KPGTKVLYLGADSYTTVSHLSDIVGTSGMVYAVTSS--PCPHLE 213
                           KPG +VLYLGA S TTVSH+SD+VG +G+VYAV  S      L 
Sbjct: 130 SKLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLV 189

Query: 212 NMKTKRVNVVPVVGDVMHPTEYIKDIEPVDGYIFS 108
           NM  KR NV+P++ D  HP +Y   +  VD  IFS
Sbjct: 190 NMAKKRTNVIPIIEDARHPAKYRMLVGMVD-VIFS 223


>ref|XP_002321930.1| predicted protein [Populus trichocarpa] gi|222868926|gb|EEF06057.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 69/155 (44%), Positives = 80/155 (51%), Gaps = 36/155 (23%)
 Frame = -2

Query: 464 SNGVIVPHPRHEGVFMLDSKQ--LFTINMVPGEAVYGETLHSVQ---------------- 339
           S  V+ PH RHEGVF+   K+  L T NMVPGE VY E   SVQ                
Sbjct: 5   SKVVVEPH-RHEGVFIAKGKEDALVTKNMVPGETVYNEKKVSVQNEDGTKVEYRVWNPFR 63

Query: 338 ----------------KPGTKVLYLGADSYTTVSHLSDIVGTSGMVYAVTSS--PCPHLE 213
                           KPG KVLYLGA S TTVSH+SDIVG +G+VYAV  S      L 
Sbjct: 64  SKLAAAILGGVDDVWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLV 123

Query: 212 NMKTKRVNVVPVVGDVMHPTEYIKDIEPVDGYIFS 108
           NM  KR NV+P++ D  HP +Y   +  VD  IFS
Sbjct: 124 NMAKKRTNVIPIIEDARHPAKYRMLVGMVD-VIFS 157


>ref|XP_002318803.1| predicted protein [Populus trichocarpa] gi|222859476|gb|EEE97023.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 69/155 (44%), Positives = 80/155 (51%), Gaps = 36/155 (23%)
 Frame = -2

Query: 464 SNGVIVPHPRHEGVFMLDSKQ--LFTINMVPGEAVYGETLHSVQ---------------- 339
           S  V+ PH RHEGVF+   K+  L T NMVPGE VY E   SVQ                
Sbjct: 5   SKVVVEPH-RHEGVFIAKGKEDALVTKNMVPGETVYNEKKISVQNEDGTKVEYRVWNPFR 63

Query: 338 ----------------KPGTKVLYLGADSYTTVSHLSDIVGTSGMVYAVTSS--PCPHLE 213
                           KPG KVLYLGA S TTVSH+SDIVG +G+VYAV  S      L 
Sbjct: 64  SKLASAILGGVDDVWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLV 123

Query: 212 NMKTKRVNVVPVVGDVMHPTEYIKDIEPVDGYIFS 108
           NM  KR NV+P++ D  HP +Y   +  VD  IFS
Sbjct: 124 NMAKKRTNVIPIIEDARHPAKYRMLVGMVD-VIFS 157


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