BLASTX nr result

ID: Cnidium21_contig00017429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017429
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   401   e-141
gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]          400   e-140
ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, p...   400   e-137
ref|XP_004150371.1| PREDICTED: probable pectate lyase 12-like [C...   382   e-137
ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus c...   388   e-136

>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
           gi|296085972|emb|CBI31413.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  401 bits (1031), Expect(2) = e-141
 Identities = 190/285 (66%), Positives = 223/285 (78%), Gaps = 5/285 (1%)
 Frame = +2

Query: 74  VYRRILTSTSK-----VELNDQLSCITGNPIDDCWQCDPNWGSNRQRLADCAIXXXXXXX 238
           V RR+  S S+     V+ ND  SC+TGNP+DDCW+CDPNW +NRQRLADC I       
Sbjct: 44  VQRRLNVSISRRQVLSVQENDGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGLDAM 103

Query: 239 XXXXXQIYMVTDSSDNDVANPKAGSLRFAVIQAEPLWIIFSTNMQIKLSHELIVSSFKTI 418
                Q Y+VTDSSD D  NP  G+LR AVIQ +PLWI FSTNM IKL +ELIV+SFKTI
Sbjct: 104 GGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTI 163

Query: 419 DGRGANVYITGKGCITIQDVSNVIIHNIHIYNCVPSGSAAIRLSPTQVEHKGKSDGDGIS 598
           DGRGANV+ITG+GC+T+Q VSNVIIH +H+++CVPSG+A IR SPT V  +GKSDGDGIS
Sbjct: 164 DGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSGNADIRSSPTHVGWRGKSDGDGIS 223

Query: 599 IQHSRNIWVDHCAVSHCTDGLMDVTEGSTAVTISNNYFSHHDKVMLLGHSDNYMLDKGMQ 778
           I  SR IW+DHC++S+C DGL+D   GST +TISNNYFSHHD+VMLLGH D Y  D GMQ
Sbjct: 224 IFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDKYSPDSGMQ 283

Query: 779 VTIAFNHFGVQLVQRMPRCRYGYFHVVNNDYTEWKMYAIGGSSAP 913
           VTIAFNHFG  LVQRMPRCR GY HVVNND+T+W+MYAIGGS+ P
Sbjct: 284 VTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSANP 328



 Score =  128 bits (321), Expect(2) = e-141
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
 Frame = +1

Query: 916  IISQGNRYAAPNDASSKQVTKRLDGDQGDWAGWEWRSEGDLMVNGAYFLPSGQGLNNLYA 1095
            I SQGNRY AP D ++K+VTKR++ D+ DWA W WR+EGD+MVNGA+F+PSG GL+  YA
Sbjct: 330  INSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGVGLSTQYA 389

Query: 1096 KDSGAEPKSAAMIDKLTFSAGVLGGPRDNGDHIS----QNSGTSSDGNESGG 1239
            K S  EPKSAA+I +LT +AG L G RD+   +S     + GTSS  + +GG
Sbjct: 390  KASSVEPKSAALIQQLTMNAGALSGSRDDSMGVSYPGFSSGGTSSSISNNGG 441


>gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]
          Length = 496

 Score =  400 bits (1029), Expect(2) = e-140
 Identities = 190/285 (66%), Positives = 222/285 (77%), Gaps = 5/285 (1%)
 Frame = +2

Query: 74  VYRRILTSTSK-----VELNDQLSCITGNPIDDCWQCDPNWGSNRQRLADCAIXXXXXXX 238
           V RR+  S S+     V+ ND  SC+TGNP+DDCW+CDPNW +NRQRLADC I       
Sbjct: 44  VQRRLNVSISRRQVLSVQENDGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGQDAM 103

Query: 239 XXXXXQIYMVTDSSDNDVANPKAGSLRFAVIQAEPLWIIFSTNMQIKLSHELIVSSFKTI 418
                Q Y+VTDSSD D  NP  G+LR AVIQ +PLWI FSTNM IKL +ELIV+SFKTI
Sbjct: 104 GGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTI 163

Query: 419 DGRGANVYITGKGCITIQDVSNVIIHNIHIYNCVPSGSAAIRLSPTQVEHKGKSDGDGIS 598
           DGRGANV+ITG+GC+T+Q VSNVIIH +H+++CVPSG+A IR SPT V  +GKSDGDGIS
Sbjct: 164 DGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSGNADIRSSPTHVGWRGKSDGDGIS 223

Query: 599 IQHSRNIWVDHCAVSHCTDGLMDVTEGSTAVTISNNYFSHHDKVMLLGHSDNYMLDKGMQ 778
           I  SR IW+DHC++S+C DGL+D   GST +TISNNYFSHHD+VMLLGH D Y  D GMQ
Sbjct: 224 IFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDKYSPDSGMQ 283

Query: 779 VTIAFNHFGVQLVQRMPRCRYGYFHVVNNDYTEWKMYAIGGSSAP 913
           VTIAFNHFG  LVQRMPRCR GY HVVNND+T W+MYAIGGS+ P
Sbjct: 284 VTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTRWEMYAIGGSANP 328



 Score =  127 bits (320), Expect(2) = e-140
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
 Frame = +1

Query: 916  IISQGNRYAAPNDASSKQVTKRLDGDQGDWAGWEWRSEGDLMVNGAYFLPSGQGLNNLYA 1095
            I SQGNRY AP D ++K+VTKR++ D+ DWA W WR+EGD+MVNGA+F+PSG GL+  YA
Sbjct: 330  INSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGVGLSTQYA 389

Query: 1096 KDSGAEPKSAAMIDKLTFSAGVLGGPRDNGDHIS----QNSGTSSDGNESGG 1239
            K S  EPKSAA+I +LT +AG L G RD+   +S     + GTSS  + +GG
Sbjct: 390  KASSVEPKSAALIQQLTMNAGALSGSRDDSMGLSYPGFSSGGTSSSISNNGG 441


>ref|XP_004173516.1| PREDICTED: probable pectate lyase 12-like, partial [Cucumis
           sativus]
          Length = 370

 Score =  400 bits (1028), Expect(2) = e-137
 Identities = 189/282 (67%), Positives = 225/282 (79%), Gaps = 1/282 (0%)
 Frame = +2

Query: 71  TVYRRILTSTSKVELNDQ-LSCITGNPIDDCWQCDPNWGSNRQRLADCAIXXXXXXXXXX 247
           +V+RR + S   +E  DQ  SC+TGNPIDDCW+CDPNW +NRQRLADC I          
Sbjct: 5   SVWRRQMLS---IESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGK 61

Query: 248 XXQIYMVTDSSDNDVANPKAGSLRFAVIQAEPLWIIFSTNMQIKLSHELIVSSFKTIDGR 427
             +IY+VTDSSD D  NP  G+LR AVIQ EPLWIIFS +M I+L +ELI++SFKTIDGR
Sbjct: 62  GGKIYIVTDSSDLDPTNPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGR 121

Query: 428 GANVYITGKGCITIQDVSNVIIHNIHIYNCVPSGSAAIRLSPTQVEHKGKSDGDGISIQH 607
           GANV+ITG GCITIQ VSNVIIHN+H+++C PSG+A IR +PT V H+G SDGDGISI  
Sbjct: 122 GANVHITGGGCITIQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFS 181

Query: 608 SRNIWVDHCAVSHCTDGLMDVTEGSTAVTISNNYFSHHDKVMLLGHSDNYMLDKGMQVTI 787
           SR IW+DHC++S+CTDGL+D   GST +TISN+YFSHHD+VMLLGH D Y+ D GMQVTI
Sbjct: 182 SRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTI 241

Query: 788 AFNHFGVQLVQRMPRCRYGYFHVVNNDYTEWKMYAIGGSSAP 913
           AFNHFG  LVQRMPRCR+GY HVVNND+T W+MYAIGGS+ P
Sbjct: 242 AFNHFGEALVQRMPRCRHGYIHVVNNDFTAWQMYAIGGSAQP 283



 Score =  117 bits (292), Expect(2) = e-137
 Identities = 51/86 (59%), Positives = 68/86 (79%)
 Frame = +1

Query: 916  IISQGNRYAAPNDASSKQVTKRLDGDQGDWAGWEWRSEGDLMVNGAYFLPSGQGLNNLYA 1095
            I SQGNRY AP D ++K+VT+RLD  + +WAGW WR++GD++VNGA+F+PSG GL+  Y 
Sbjct: 285  INSQGNRYTAPVDPNAKEVTRRLDAAETEWAGWNWRTDGDILVNGAFFVPSGAGLSTQYG 344

Query: 1096 KDSGAEPKSAAMIDKLTFSAGVLGGP 1173
            K S  EPKS A+I++LT +AGVLG P
Sbjct: 345  KASSVEPKSVALINQLTMNAGVLGAP 370


>ref|XP_004150371.1| PREDICTED: probable pectate lyase 12-like [Cucumis sativus]
          Length = 489

 Score =  382 bits (980), Expect(2) = e-137
 Identities = 179/278 (64%), Positives = 219/278 (78%)
 Frame = +2

Query: 80  RRILTSTSKVELNDQLSCITGNPIDDCWQCDPNWGSNRQRLADCAIXXXXXXXXXXXXQI 259
           R++L+  SK + N   SC T NPIDDCW+CD NW +NRQRLADC I            QI
Sbjct: 57  RQMLSIHSKGQSN---SCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQI 113

Query: 260 YMVTDSSDNDVANPKAGSLRFAVIQAEPLWIIFSTNMQIKLSHELIVSSFKTIDGRGANV 439
           Y+VTDSSD D  NP+ G+LR+AV+Q EPLWI+F+ +M IKL +EL+++S+KT+DGRGANV
Sbjct: 114 YVVTDSSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANV 173

Query: 440 YITGKGCITIQDVSNVIIHNIHIYNCVPSGSAAIRLSPTQVEHKGKSDGDGISIQHSRNI 619
           +ITG GCIT+Q +SNVIIHNI+I++CVP+G   IR SPT V ++GKSDGDGISI  SRNI
Sbjct: 174 HITGGGCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNI 233

Query: 620 WVDHCAVSHCTDGLMDVTEGSTAVTISNNYFSHHDKVMLLGHSDNYMLDKGMQVTIAFNH 799
           W+DHC++S+CTDGL+D   GST +TISNNYFSHHD+VMLLGH D +  D GMQVTIAFN 
Sbjct: 234 WIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNL 293

Query: 800 FGVQLVQRMPRCRYGYFHVVNNDYTEWKMYAIGGSSAP 913
           FG +LVQRMPRCR GY HVVNND+  W+MYAIGGS  P
Sbjct: 294 FGEKLVQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNP 331



 Score =  134 bits (338), Expect(2) = e-137
 Identities = 64/116 (55%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
 Frame = +1

Query: 916  IISQGNRYAAPNDASSKQVTKRLDGDQGDWAGWEWRSEGDLMVNGAYFLPSGQGLNNLYA 1095
            I SQGNRY AP + ++K+VTKR+D + GDW+ W WR+EGD+MVNGA+F+PSG+GL+N+Y 
Sbjct: 333  INSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYV 392

Query: 1096 KDSGAEPKSAAMIDKLTFSAGVLGGPRDN-------GDHISQNSGTSSDGNESGGD 1242
            K S   PKSAA++D+LT +AGV GG R+N       GD  S +S  SS G++ GGD
Sbjct: 393  KASSLPPKSAALVDQLTLNAGVFGGSRENRQSTSYPGDEASSSSSGSS-GSDGGGD 447


>ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223525981|gb|EEF28369.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 503

 Score =  388 bits (997), Expect(2) = e-136
 Identities = 183/283 (64%), Positives = 220/283 (77%), Gaps = 3/283 (1%)
 Frame = +2

Query: 74  VYRRILTSTSKVELNDQL---SCITGNPIDDCWQCDPNWGSNRQRLADCAIXXXXXXXXX 244
           V R I  S S+ +L   L    C TGNPIDDCW+CDPNW +NRQRLADC I         
Sbjct: 46  VQRTINASVSRRQLLSTLPKDQCQTGNPIDDCWRCDPNWANNRQRLADCTIGFGQGSLGG 105

Query: 245 XXXQIYMVTDSSDNDVANPKAGSLRFAVIQAEPLWIIFSTNMQIKLSHELIVSSFKTIDG 424
              QIY+VTDSSD+D +NP  G+LR+ VIQ EPLWIIF+++M IKL HELI +S+KTIDG
Sbjct: 106 RGGQIYVVTDSSDHDPSNPTPGTLRYGVIQNEPLWIIFASSMTIKLKHELIFNSYKTIDG 165

Query: 425 RGANVYITGKGCITIQDVSNVIIHNIHIYNCVPSGSAAIRLSPTQVEHKGKSDGDGISIQ 604
           RGANV+ITG GC+T+Q VS++IIHNIHI++C PSG+  I  SPT V ++G+SDGDGISI 
Sbjct: 166 RGANVHITGNGCLTLQYVSHIIIHNIHIHHCKPSGNTNIAASPTHVGYRGRSDGDGISIF 225

Query: 605 HSRNIWVDHCAVSHCTDGLMDVTEGSTAVTISNNYFSHHDKVMLLGHSDNYMLDKGMQVT 784
            S+ IW+DHC++S+CTDGL+D   GST +TISNNYFSHHD+VMLLGH D Y+LD GMQVT
Sbjct: 226 GSQKIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDKYVLDSGMQVT 285

Query: 785 IAFNHFGVQLVQRMPRCRYGYFHVVNNDYTEWKMYAIGGSSAP 913
           IAFN FG  LVQRMPRCR GY HVVNND+  W+MYAIGGS+ P
Sbjct: 286 IAFNRFGQALVQRMPRCRRGYIHVVNNDFLYWEMYAIGGSANP 328



 Score =  124 bits (311), Expect(2) = e-136
 Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
 Frame = +1

Query: 916  IISQGNRYAAPNDASSKQVTKRLDGDQGDWAGWEWRSEGDLMVNGAYFLPSGQGLNNLYA 1095
            I SQGNRY AP D ++K+VTKR++ D+ DWA W WR++GD+++NGA+F+PSG GL+  YA
Sbjct: 330  INSQGNRYVAPADPNAKEVTKRVETDEKDWADWNWRTDGDVLINGAFFVPSGAGLSAQYA 389

Query: 1096 KDSGAEPKSAAMIDKLTFSAGVLGGPRDNGDHISQNSGTSSDGNESGGDRTFXXXXXXXX 1275
            K S  EPKSAA+I +LT +AGV G  R+  + IS N G    G  +G   T         
Sbjct: 390  KASSVEPKSAALITQLTLNAGVFGDARERDEGIS-NPGFIGGGTTTGTTNT---GSAGST 445

Query: 1276 XXXXXXXXXAFGSGGE----QLVSAANIFLSLLVFV 1371
                      FGSG       L S++++ LS+L+ +
Sbjct: 446  GGDGDYFGMIFGSGASPSPPPLASSSSVVLSVLIII 481


Top