BLASTX nr result

ID: Cnidium21_contig00017424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017424
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Gl...   190   1e-46
emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. a...   186   2e-45
ref|XP_002319058.1| tir-nbs-lrr resistance protein [Populus tric...   184   7e-45
gb|AAO23069.1| R 4 protein [Glycine max]                              181   6e-44
ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Gl...   181   6e-44

>ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score =  190 bits (483), Expect = 1e-46
 Identities = 94/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = -2

Query: 522 YDVFLSFRGKDTRLSFTSHLYQRLDDHGIRTFMDDPELHGGEVISDALIQAIQESKTYIV 343
           YDVFLSFRG+DTR +FT HLY+ L D GI TF+DD +L  GE I+ AL++AIQ+S+  I 
Sbjct: 16  YDVFLSFRGEDTRHAFTGHLYKALHDKGIHTFIDDEKLQRGEQITRALMEAIQDSRVAIT 75

Query: 342 VFSENYATSPWCLNELVEILNCHKAAQRLVIPVFYKIDPSVVRHQTGSFKQAFKKHQKRF 163
           V S+NYA+S +CL+EL  IL+CH+  + LVIPVFYK+DPS VRHQ GS+ +A +K + RF
Sbjct: 76  VLSQNYASSSFCLDELATILHCHQRKRLLVIPVFYKVDPSDVRHQKGSYAEALEKLETRF 135

Query: 162 RGETEKLENWRLTLKEVADFSGYHISKNRS-QADIINEIVHELLLVINPKTLDVA 1
           + + EKL+ W++ LK+VAD SGYH  +    +   I +IV  +   INP+TL VA
Sbjct: 136 QHDPEKLQKWKMALKQVADLSGYHFKEGDGYEFKFIEKIVERVSREINPRTLHVA 190


>emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
 Frame = -2

Query: 525 KYDVFLSFRGKDTRLSFTSHLYQRLDDHGIRTFMDDPELHGGEVISDALIQAIQESKTYI 346
           KYDVFLSFRGKDTR +FTSHLY+RLD+ GI TF+DD  L  G+ +S  L++AI+ES+  +
Sbjct: 22  KYDVFLSFRGKDTRRNFTSHLYERLDNRGIFTFLDDKRLENGDSLSKELVKAIKESQVAV 81

Query: 345 VVFSENYATSPWCLNELVEILNCHKAAQRLVIPVFYKIDPSVVRHQTGSFKQAFKKHQKR 166
           ++FS+NYATS WCLNE+V+I+ C +   +LVIPVFY +DPS VR QT SF +AF +H+ R
Sbjct: 82  IIFSKNYATSRWCLNEVVKIMECKEENGQLVIPVFYDVDPSDVRKQTKSFAEAFAEHESR 141

Query: 165 FRGETE---KLENWRLTLKEVADFSGYHISKNRSQADIINEIVHELLLVINPKTLDVA 1
           ++ + E   K++ WR  L E AD  GY I + R +++ I E+V+E    I+PK  + +
Sbjct: 142 YKDDVEGMQKVQRWRTALSEAADLKGYDI-RERIESECIGELVNE----ISPKLCETS 194


>ref|XP_002319058.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222857434|gb|EEE94981.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 522

 Score =  184 bits (467), Expect = 7e-45
 Identities = 94/176 (53%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
 Frame = -2

Query: 522 YDVFLSFRGKDTRLSFTSHLYQRLDDHGIRTFMDDPELHGGEVISDALIQAIQESKTYIV 343
           YDVFLSFRG+DTR +FT HLY  L + GI TF DD EL  GE IS  L++AI+ESK  IV
Sbjct: 10  YDVFLSFRGEDTRKNFTDHLYTALQNAGIHTFRDDNELPKGEEISSHLLKAIKESKISIV 69

Query: 342 VFSENYATSPWCLNELVEILNCHKAAQRLVIPVFYKIDPSVVRHQTGSFKQAFKKHQKRF 163
           VFS+ YA+S WCL+EL EIL+C + A ++V+PVFY IDPS +R QTGSF +AF +H++RF
Sbjct: 70  VFSKGYASSTWCLDELSEILDCRQTAGQIVLPVFYDIDPSDIRKQTGSFAEAFDRHEERF 129

Query: 162 RGETEKLENWRLTLKEVADFSG--YHISKNRSQADIINEIVHELLLVINPKTLDVA 1
           + E EK++ WR  L E    SG   H   N  ++ +I  IV E+L  +NP+ + VA
Sbjct: 130 KEEMEKVQKWRKALVEAGRLSGLDLHSIANGHESKLIQMIVEEVLSKLNPRYMKVA 185


>gb|AAO23069.1| R 4 protein [Glycine max]
          Length = 895

 Score =  181 bits (459), Expect = 6e-44
 Identities = 97/175 (55%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
 Frame = -2

Query: 522 YDVFLSFRGKDTRLSFTSHLYQRLDDHGIRTFMDDPELHGGEVISDALIQAIQESKTYIV 343
           YDVFLSFRG DTR  FT +LY+ LDD GI T +DD EL  G+ I+ AL +AIQES+  I 
Sbjct: 12  YDVFLSFRGLDTRHGFTGNLYKALDDRGIYTSIDDQELPRGDEITPALSKAIQESRIAIT 71

Query: 342 VFSENYATSPWCLNELVEILNCHKAAQRLVIPVFYKIDPSVVRHQTGSFKQAFKKHQKRF 163
           V S+NYA+S +CL+ELV IL+C K+   LVIPVFYK+DPS VRHQ GS+ +A  KHQKRF
Sbjct: 72  VLSQNYASSSFCLDELVTILHC-KSEGLLVIPVFYKVDPSDVRHQKGSYGEAMAKHQKRF 130

Query: 162 RGETEKLENWRLTLKEVADFSGYHISKNRS-QADIINEIVHELLLVINPKTLDVA 1
           + + EKL+ WR+ LK+VAD SGYH     + +   I  IV E+   I+  +L VA
Sbjct: 131 KAKKEKLQKWRMALKQVADLSGYHFEDGDAYEYKFIGSIVEEVSRKISRASLHVA 185


>ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 873

 Score =  181 bits (459), Expect = 6e-44
 Identities = 88/176 (50%), Positives = 126/176 (71%), Gaps = 1/176 (0%)
 Frame = -2

Query: 525 KYDVFLSFRGKDTRLSFTSHLYQRLDDHGIRTFMDDPELHGGEVISDALIQAIQESKTYI 346
           KYDVFLSFRG DTR  FT HLY+ L D GI TF+D+ EL  GE I+ +L++AI++S+  I
Sbjct: 11  KYDVFLSFRGSDTRHGFTGHLYKALLDRGIYTFIDNEELQRGEEITPSLVKAIEDSRIAI 70

Query: 345 VVFSENYATSPWCLNELVEILNCHKAAQRLVIPVFYKIDPSVVRHQTGSFKQAFKKHQKR 166
           +VFS+NYA+S +CL+ELV IL C K    +V+PVFY++DPS VRHQ GS+++A  KH+++
Sbjct: 71  LVFSKNYASSTFCLDELVHILACVKEKGTMVLPVFYEVDPSDVRHQRGSYEEALNKHKEK 130

Query: 165 FRGETEKLENWRLTLKEVADFSGYHISK-NRSQADIINEIVHELLLVINPKTLDVA 1
           F  + EKL+ WR+ L++ A+ SGYH    N ++ D + +I+ E+   I+   L VA
Sbjct: 131 FNDDEEKLQKWRIALRQAANLSGYHFKHGNENEYDFVGKIIKEVSQRISRTHLHVA 186


Top