BLASTX nr result

ID: Cnidium21_contig00017421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017421
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256...   110   2e-22
ref|XP_004140287.1| PREDICTED: uncharacterized protein LOC101209...    94   2e-17
ref|NP_194884.1| high chlorophyll fluorescence 153 protein [Arab...    93   3e-17
ref|XP_002862560.1| hypothetical protein ARALYDRAFT_497397 [Arab...    91   1e-16
ref|XP_003598901.1| hypothetical protein MTR_3g023160 [Medicago ...    91   1e-16

>ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256905 [Vitis vinifera]
          Length = 133

 Score =  110 bits (275), Expect = 2e-22
 Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
 Frame = -1

Query: 567 LSPVV-FSGGLKSR--RGSSVVTRAVPGPNTYIFAFVFPLSLLVATVFTTLRISDKLDED 397
           +SP V FSG L  R  RG SVVTRA P  ++Y+FAFVFPLSLL  T+FT+LR+ DKL+ +
Sbjct: 32  ISPAVRFSGELCRRKTRGLSVVTRAGPSTSSYVFAFVFPLSLLAVTIFTSLRVDDKLERE 91

Query: 396 FLQELAVNQAILEASEDDEDDGTSTQ-EPERPRTRNRPKREA 274
           FL+ELAVN+A+ EA E++ D     + EP  PRTRNRPKREA
Sbjct: 92  FLEELAVNEAMREADEEEGDVAIPVEKEPAVPRTRNRPKREA 133


>ref|XP_004140287.1| PREDICTED: uncharacterized protein LOC101209610 [Cucumis sativus]
          Length = 133

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = -1

Query: 552 FSGGLKSRRGSSVVTRAVPGPNTYIFAFVFPLSLLVATVFTTLRISDKLDEDFLQELAVN 373
           F+    SR    V TRA    ++YIFAF  PLSL++ TV T L+I D LD+ FL+ELA+N
Sbjct: 37  FANPSPSRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALN 96

Query: 372 QAILEASEDDEDDG--TSTQEPERPRTRNRPKREAEV 268
           QAI+E  ED ED    +  ++P  PRTRNRPKREAEV
Sbjct: 97  QAIMEEDEDYEDGSEISFEEKPTVPRTRNRPKREAEV 133


>ref|NP_194884.1| high chlorophyll fluorescence 153 protein [Arabidopsis thaliana]
           gi|11692862|gb|AAG40034.1|AF324683_1 AT4g31560
           [Arabidopsis thaliana]
           gi|11908100|gb|AAG41479.1|AF326897_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642912|gb|AAK00398.1|AF339716_1 unknown protein
           [Arabidopsis thaliana]
           gi|13926337|gb|AAK49632.1|AF372916_1 AT4g31560/F3L17_130
           [Arabidopsis thaliana] gi|5262767|emb|CAB45915.1|
           putative protein [Arabidopsis thaliana]
           gi|7270059|emb|CAB79874.1| putative protein [Arabidopsis
           thaliana] gi|21592375|gb|AAM64326.1| unknown
           [Arabidopsis thaliana] gi|27363346|gb|AAO11592.1|
           At4g31560/F3L17_130 [Arabidopsis thaliana]
           gi|332660529|gb|AEE85929.1| high chlorophyll
           fluorescence 153 protein [Arabidopsis thaliana]
          Length = 137

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 8/99 (8%)
 Frame = -1

Query: 549 SGGL---KSRRGSSVVTRAVPGPNTYIFAFVFPLSLLVATVFTTLRISDKLDEDFLQELA 379
           +GGL   +  R SSVVTRA P  ++Y+ AF  P +L+ ATVFT+++I+DKLDEDFL+++A
Sbjct: 38  AGGLCLTRRIRDSSVVTRAGPSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIA 97

Query: 378 VNQAILEASEDDEDDGTST-----QEPERPRTRNRPKRE 277
           +NQAI  A + +  +G  +     QEP   RTRNRPKRE
Sbjct: 98  LNQAIKAAEKGENGEGDISLDDVIQEPVLQRTRNRPKRE 136


>ref|XP_002862560.1| hypothetical protein ARALYDRAFT_497397 [Arabidopsis lyrata subsp.
           lyrata] gi|297308158|gb|EFH38818.1| hypothetical protein
           ARALYDRAFT_497397 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 8/99 (8%)
 Frame = -1

Query: 549 SGGL---KSRRGSSVVTRAVPGPNTYIFAFVFPLSLLVATVFTTLRISDKLDEDFLQELA 379
           +GGL   +  R  SVVTRA P  ++Y+ AF  P +L+ ATVFT+++I+DKLDEDFL+++A
Sbjct: 38  AGGLCLTRRIRDCSVVTRAGPSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIA 97

Query: 378 VNQAILEASEDDEDDGTST-----QEPERPRTRNRPKRE 277
           +NQAI  A + +  +G  +     QEP   RTRNRPKRE
Sbjct: 98  LNQAIKAAEKGENGEGEISLDDVIQEPVLQRTRNRPKRE 136


>ref|XP_003598901.1| hypothetical protein MTR_3g023160 [Medicago truncatula]
           gi|355487949|gb|AES69152.1| hypothetical protein
           MTR_3g023160 [Medicago truncatula]
          Length = 133

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 9/106 (8%)
 Frame = -1

Query: 564 SPVVFSGGLKSRRGSSVVTRAVPGPNTYIFAFVFPLSLLVATVFTTLRISDKLDEDFLQE 385
           SP++ +G  +  R ++VVTRA    ++Y FA   PLSLL  TVFT LRI  KLD+DF +E
Sbjct: 29  SPLLLTG-CRRPRPATVVTRAGASTSSYAFAIALPLSLLGITVFTALRIGQKLDQDFYEE 87

Query: 384 LAVNQAILEASEDDEDD---------GTSTQEPERPRTRNRPKREA 274
           +A N+AI+E  E++E+D             QEP  PR RNRPKREA
Sbjct: 88  MAKNEAIMEIDEEEEEDNDDDDVETYSQEEQEPVLPRGRNRPKREA 133


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