BLASTX nr result
ID: Cnidium21_contig00017383
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00017383
(682 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig... 89 2e-39
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera] 88 4e-39
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 87 3e-38
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 77 1e-37
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 92 2e-37
>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
Length = 383
Score = 88.6 bits (218), Expect(3) = 2e-39
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Frame = +3
Query: 144 YLGLEIHMTSAGLFLHQHKFVHDMLVEAGLENAKPLSLPLDS---IKLTDGELLEDPSIY 314
+LG E + AGLFL+Q K+ D++ EAGL KP +P+D+ + L+ LLEDP+ Y
Sbjct: 116 FLGFEAARSDAGLFLNQRKYALDLISEAGLLGCKPSKIPMDTKHKLSLSTSPLLEDPAPY 175
Query: 315 RKFVGKLLYL--QFPGXXXXXXXXXXXXN-PRVPHLHAVQRVLRYLKAAPFQGLYFDDNS 485
R+ VG+L+YL P N P HL A RVLRYLK P QG+++ N
Sbjct: 176 RRLVGQLIYLTNTRPDLAYSVHILSQFMNKPTEDHLAAAHRVLRYLKGCPAQGVFYPSNQ 235
Query: 486 TL 491
TL
Sbjct: 236 TL 237
Score = 71.6 bits (174), Expect(3) = 2e-39
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 484 LHLEAYCDSDWGXXXXXXXXXXXICLLLGTSLVSWSSKKQPVVSRSTAEAELRALADTSC 663
L L +CD+DWG C+LLG S++SW +KKQ +VSRS+AEAE RA+A C
Sbjct: 237 LQLSVFCDADWGSCPLTRRSVSGCCVLLGQSVISWKTKKQAIVSRSSAEAEYRAMAHACC 296
Query: 664 DSSW 675
+ SW
Sbjct: 297 EVSW 300
Score = 48.9 bits (115), Expect(3) = 2e-39
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1
Query: 1 SLFTMTTANSFIITLVYVDDILLTGNNTELIDHVKTVLHTCFTIKDL 141
SLFT F+ LVYVDD+++TG + LI VK+ +H F IKDL
Sbjct: 64 SLFTYNKDGVFLALLVYVDDVIITGTSHSLIQSVKSYIHDLFRIKDL 110
>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
Length = 1131
Score = 87.8 bits (216), Expect(3) = 4e-39
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Frame = +3
Query: 144 YLGLEIHMTSAGLFLHQHKFVHDMLVEAGLENAKPLSLPLDS---IKLTDGELLEDPSIY 314
+LG+E+ ++ G+ + Q K+ D+L EAGL AKPL P++ + T G+LL++PS Y
Sbjct: 850 FLGIEVARSTDGILISQRKYTLDILDEAGLLGAKPLLTPMEENNKLLPTVGDLLKNPSTY 909
Query: 315 RKFVGKLLYLQFPGXXXXXXXXXXXX---NPRVPHLHAVQRVLRYLKAAPFQGLYFDDNS 485
R+ VG+L+YL PR PHLH V +L+YLK AP QGLYF
Sbjct: 910 RRLVGQLIYLTITRXEISYSVHILSQFMQEPRKPHLHVVHHLLQYLKGAPGQGLYFPAKG 969
Query: 486 TL 491
L
Sbjct: 970 NL 971
Score = 63.9 bits (154), Expect(3) = 4e-39
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +1
Query: 484 LHLEAYCDSDWGXXXXXXXXXXXICLLLGTSLVSWSSKKQPVVSRSTAEAELRALADTSC 663
L L +CD+DW C+ LG +L+SW +KKQ VSRS+AE+E RA+A +C
Sbjct: 971 LLLRGFCDADWARCSITRRSVTGYCIFLGGALISWKTKKQTTVSRSSAESEYRAMASITC 1030
Query: 664 DSSW 675
+ +W
Sbjct: 1031 ELTW 1034
Score = 56.6 bits (135), Expect(3) = 4e-39
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +1
Query: 1 SLFTMTTANSFIITLVYVDDILLTGNNTELIDHVKTVLHTCFTIKDL 141
SLFT + NSFI+ L+YVDD+++TGN+ +I +K LHT F IKDL
Sbjct: 798 SLFTKISGNSFIVVLIYVDDMIITGNDENVIAALKESLHTKFRIKDL 844
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 87.0 bits (214), Expect(3) = 3e-38
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Frame = +3
Query: 144 YLGLEIHMTSAGLFLHQHKFVHDMLVEAGLENAKPLSLPLD-SIKLT--DGELLEDPSIY 314
+LG+E + G+F+ Q K+ D+L + GL KP P++ ++KLT DGELL DPS Y
Sbjct: 1448 FLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRY 1507
Query: 315 RKFVGKLLYLQF--PGXXXXXXXXXXXXN-PRVPHLHAVQRVLRYLKAAPFQGLYFDDNS 485
R+ VG+L+YL P N PR PH A RVLRY+K +P QGL+ +
Sbjct: 1508 RRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSEN 1567
Query: 486 TL 491
L
Sbjct: 1568 NL 1569
Score = 70.5 bits (171), Expect(3) = 3e-38
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +1
Query: 484 LHLEAYCDSDWGXXXXXXXXXXXICLLLGTSLVSWSSKKQPVVSRSTAEAELRALADTSC 663
L L A+CDSDWG C+ LG+SL+SW SKKQ VSRS+AEAE RA+A+T
Sbjct: 1569 LTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCL 1628
Query: 664 DSSW 675
+ +W
Sbjct: 1629 ELTW 1632
Score = 47.8 bits (112), Expect(3) = 3e-38
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +1
Query: 1 SLFTMTTANSFIITLVYVDDILLTGNNTELIDHVKTVLHTCFTIKDL 141
SLFT + N F L+YVDDILLTGN+ I +KT L F IKDL
Sbjct: 1396 SLFTKSQGNKFTAILIYVDDILLTGNDLHEIKMLKTHLLKRFFIKDL 1442
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 77.0 bits (188), Expect(3) = 1e-37
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Frame = +3
Query: 144 YLGLEIHMTSAGLFLHQHKFVHDMLVEAGLENAKPLSLPLD-SIKLTDGE---LLEDPSI 311
++G+E+ ++ G+ L Q K+ D+L ++G +KP+ P++ S+KLT + LL DP+
Sbjct: 844 FVGIEVARSAKGIVLSQRKYALDVLKDSGFFGSKPIGFPMESSLKLTANDSSPLLSDPAS 903
Query: 312 YRKFVGKLLYL---QFPGXXXXXXXXXXXXNPRVPHLHAVQRVLRYLKAAPFQGLYFDDN 482
Y++ +GKLLYL + NP HL A +RVLRY+KA QGL+ +
Sbjct: 904 YKRLIGKLLYLTITRLDLAYXVQALNQFMSNPHSTHLQAAERVLRYIKATLGQGLFLKAS 963
Query: 483 STL 491
S L
Sbjct: 964 SDL 966
Score = 73.9 bits (180), Expect(3) = 1e-37
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +1
Query: 484 LHLEAYCDSDWGXXXXXXXXXXXICLLLGTSLVSWSSKKQPVVSRSTAEAELRALADTSC 663
LHL+AY DSDWG + +G SL+SW SKKQP +SRS+A+AE RALA T+C
Sbjct: 966 LHLKAYSDSDWGGCINTRRSVTGFTVFIGDSLISWKSKKQPTISRSSAKAEYRALATTTC 1025
Query: 664 DSSW 675
+ W
Sbjct: 1026 ELQW 1029
Score = 52.4 bits (124), Expect(3) = 1e-37
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1
Query: 1 SLFTMTTANSFIITLVYVDDILLTGNNTELIDHVKTVLHTCFTIKDL 141
SLF T+ SFI L+YVDD+++ N+ + ID VK LH FTIKDL
Sbjct: 792 SLFIKQTSTSFIALLIYVDDVIIASNDLKEIDVVKKFLHESFTIKDL 838
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 92.4 bits (228), Expect(3) = 2e-37
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Frame = +3
Query: 144 YLGLEIHMTSAGLFLHQHKFVHDMLVEAGLENAKPLSLPLDS---IKLTDGELLEDPSIY 314
+LG+E+ ++ G+ + Q K+ D+L EAGL AKPLS P++ + T G+LL++PS Y
Sbjct: 1180 FLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNPSTY 1239
Query: 315 RKFVGKLLYLQFPGXXXXXXXXXXXX---NPRVPHLHAVQRVLRYLKAAPFQGLYFDDNS 485
R+ VG+L+YL PR PHLHAV +LRYLK AP QGLYF
Sbjct: 1240 RRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKG 1299
Query: 486 TL 491
L
Sbjct: 1300 NL 1301
Score = 57.4 bits (137), Expect(3) = 2e-37
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 484 LHLEAYCDSDWGXXXXXXXXXXXICLLLGTSLVSWSSKKQPVVSRSTAEAELRALADTSC 663
L L +CD+DW C+ L + +SW +KKQ VSRS+ E+E RA+A +C
Sbjct: 1301 LLLRGFCDADWARCSITRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITC 1360
Query: 664 DSSW 675
+ +W
Sbjct: 1361 ELTW 1364
Score = 53.1 bits (126), Expect(3) = 2e-37
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 1 SLFTMTTANSFIITLVYVDDILLTGNNTELIDHVKTVLHTCFTIKDL 141
SLFT + NSF L+YVDD+++TGN+ +I +K LHT F IKDL
Sbjct: 1128 SLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDL 1174