BLASTX nr result

ID: Cnidium21_contig00017359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017359
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_087022.1| NADH dehydrogenase subunit 7 [Panax ginseng] gi...   114   4e-23
ref|YP_004935609.1| NADH dehydrogenase subunit 7 (chloroplast) [...   114   4e-23
gb|ABU85180.1| NADH-plastoquinone oxidoreductase subunit 7 [Anet...   114   4e-23
ref|YP_004222702.1| NADH-plastoquinone oxidoreductase subunit 7 ...   114   5e-23
gb|AFU94948.1| NdhH, partial (chloroplast) [Scyphostegia borneen...   113   1e-22

>ref|YP_087022.1| NADH dehydrogenase subunit 7 [Panax ginseng]
            gi|75289350|sp|Q68RV0.1|NDHH_PANGI RecName:
            Full=NAD(P)H-quinone oxidoreductase subunit H,
            chloroplastic; AltName: Full=NAD(P)H dehydrogenase
            subunit H; AltName: Full=NADH-plastoquinone
            oxidoreductase 49 kDa subunit; AltName:
            Full=NADH-plastoquinone oxidoreductase subunit H
            gi|51235370|gb|AAT98566.1| NADH dehydrogenase 49kD
            subunit [Panax ginseng]
          Length = 393

 Score =  114 bits (286), Expect = 4e-23
 Identities = 54/69 (78%), Positives = 57/69 (82%)
 Frame = +2

Query: 1031 LQWTIPS*KFRMVMIPWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 1210
            + W +     R   I WDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI
Sbjct: 215  INWGLSGPMLRASGIQWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 274

Query: 1211 IQQAFKGIP 1237
            IQQA +GIP
Sbjct: 275  IQQALEGIP 283


>ref|YP_004935609.1| NADH dehydrogenase subunit 7 (chloroplast) [Eleutherococcus
            senticosus] gi|347448263|gb|AEO92675.1| NADH
            dehydrogenase subunit 7 (chloroplast) [Eleutherococcus
            senticosus]
          Length = 393

 Score =  114 bits (286), Expect = 4e-23
 Identities = 54/69 (78%), Positives = 57/69 (82%)
 Frame = +2

Query: 1031 LQWTIPS*KFRMVMIPWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 1210
            + W +     R   I WDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI
Sbjct: 215  INWGLSGPMLRASGIQWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 274

Query: 1211 IQQAFKGIP 1237
            IQQA +GIP
Sbjct: 275  IQQALEGIP 283


>gb|ABU85180.1| NADH-plastoquinone oxidoreductase subunit 7 [Anethum graveolens]
          Length = 395

 Score =  114 bits (286), Expect = 4e-23
 Identities = 54/69 (78%), Positives = 57/69 (82%)
 Frame = +2

Query: 1031 LQWTIPS*KFRMVMIPWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 1210
            + W +     R   I WDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI
Sbjct: 215  INWGLSGPMLRASGIQWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 274

Query: 1211 IQQAFKGIP 1237
            IQQA +GIP
Sbjct: 275  IQQALEGIP 283


>ref|YP_004222702.1| NADH-plastoquinone oxidoreductase subunit 7 [Anthriscus cerefolium]
            gi|289645631|gb|ADD13694.1| NADH-plastoquinone
            oxidoreductase subunit 7 [Anthriscus cerefolium]
          Length = 393

 Score =  114 bits (285), Expect = 5e-23
 Identities = 53/69 (76%), Positives = 57/69 (82%)
 Frame = +2

Query: 1031 LQWTIPS*KFRMVMIPWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIKI 1210
            + W +     R   I WDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTES+KI
Sbjct: 215  INWGLSGPMLRASGIQWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESVKI 274

Query: 1211 IQQAFKGIP 1237
            IQQA +GIP
Sbjct: 275  IQQALEGIP 283


>gb|AFU94948.1| NdhH, partial (chloroplast) [Scyphostegia borneensis]
          Length = 279

 Score =  113 bits (282), Expect = 1e-22
 Identities = 52/70 (74%), Positives = 57/70 (81%)
 Frame = +2

Query: 1028 TLQWTIPS*KFRMVMIPWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRISEMTESIK 1207
            ++ W +     R   + WDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRI EMTESIK
Sbjct: 97   SINWGLSGPMLRASGVQWDLRKVDHYESYDEFDWGVQWQKEGDSLARYLVRIGEMTESIK 156

Query: 1208 IIQQAFKGIP 1237
            IIQQA +GIP
Sbjct: 157  IIQQALEGIP 166


Top