BLASTX nr result

ID: Cnidium21_contig00017350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017350
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...   121   1e-25
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]   121   1e-25
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...   103   2e-20
ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
emb|CBI33920.3| unnamed protein product [Vitis vinifera]               95   1e-17

>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score =  121 bits (303), Expect = 1e-25
 Identities = 88/200 (44%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
 Frame = -3

Query: 590  AATVTSSEKPTSLPDXXXXXXXXXXXXXXXXXXXXXEIRXXXXXXXXXXXXKMSNVLTMW 411
            AAT+TS+EK  SLPD                     EI+            KMSNVLTMW
Sbjct: 718  AATITSNEKAASLPDAVQAAATAAMAAEKKEKEKLKEIKLASKSSILANKKKMSNVLTMW 777

Query: 410  KQRSHEGQAPRLALDDKQNPSA--EDKVNAIGSSSKGKPKIEAVTMKENTVNTSGISTST 237
            KQRSHEGQA R+ALDD Q PSA  +D+ N+IG S KGK + + VT KE+T  + G +TST
Sbjct: 778  KQRSHEGQATRVALDDNQ-PSAAVDDRPNSIGPSPKGKFRTDVVTTKEHTAASGGFTTST 836

Query: 236  PVQSSGLDSQERLKP--XXXXXXXXXXXXXXXXXXVKSDTSYSGQSGITSTSLSASVGAV 63
            P  + GL+SQ + +P                    VKSDTSY G SG  STS  A+  A 
Sbjct: 837  PALTVGLESQVKARPVSNSLGGTVMGVIRGSGRGVVKSDTSYLGSSGGVSTSAPAAYTAG 896

Query: 62   DSSSPASIDLSGTALPFRTD 3
             SSS  S     T  PFRTD
Sbjct: 897  SSSSINSDTTLTT--PFRTD 914


>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
          Length = 1070

 Score =  121 bits (303), Expect = 1e-25
 Identities = 88/200 (44%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
 Frame = -3

Query: 590  AATVTSSEKPTSLPDXXXXXXXXXXXXXXXXXXXXXEIRXXXXXXXXXXXXKMSNVLTMW 411
            AAT+TS+EK  SLPD                     EI+            KMSNVLTMW
Sbjct: 683  AATITSNEKAASLPDAVQAAATAAMAAEKKEKEKLKEIKLASKSSILANKKKMSNVLTMW 742

Query: 410  KQRSHEGQAPRLALDDKQNPSA--EDKVNAIGSSSKGKPKIEAVTMKENTVNTSGISTST 237
            KQRSHEGQA R+ALDD Q PSA  +D+ N+IG S KGK + + VT KE+T  + G +TST
Sbjct: 743  KQRSHEGQATRVALDDNQ-PSAAVDDRPNSIGPSPKGKFRTDVVTTKEHTAASGGFTTST 801

Query: 236  PVQSSGLDSQERLKP--XXXXXXXXXXXXXXXXXXVKSDTSYSGQSGITSTSLSASVGAV 63
            P  + GL+SQ + +P                    VKSDTSY G SG  STS  A+  A 
Sbjct: 802  PALTVGLESQVKARPVSNSLGGTVMGVIRGSGRGVVKSDTSYLGSSGGVSTSAPAAYTAG 861

Query: 62   DSSSPASIDLSGTALPFRTD 3
             SSS  S     T  PFRTD
Sbjct: 862  SSSSINSDTTLTT--PFRTD 879


>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
            gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 962

 Score =  103 bits (257), Expect = 2e-20
 Identities = 76/200 (38%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
 Frame = -3

Query: 590  AATVTSSEKPTSLPDXXXXXXXXXXXXXXXXXXXXXEIRXXXXXXXXXXXXKMSNVLTMW 411
            AAT+TS EK  SL D                     EI+            KM+NVLTMW
Sbjct: 576  AATITSIEKAASLHDAVQAAATAALAAEKKEKEKAKEIKLASKSSILASKKKMNNVLTMW 635

Query: 410  KQRSHEGQAPRLALDDKQNPS-AEDKVNAIGSSSKGKPKIEAVTMKENTVNTSGISTSTP 234
            KQRSHEGQA R+A+DD Q+   A+DK  ++G S+K K + +AV  KE  V+TSG+ T+ P
Sbjct: 636  KQRSHEGQATRVAVDDSQSSGLADDKSYSVGQSAKSKFRSDAVATKEGVVSTSGVGTTGP 695

Query: 233  -VQSSGLDSQERLKP--XXXXXXXXXXXXXXXXXXVKSDTSYSGQSGITSTSLSASVGAV 63
              Q+ GL+S  + +P                    VKSDTS+SG     STS++      
Sbjct: 696  AAQAVGLESPVKPRPVSNSSGGTLMGVIRGSGRGVVKSDTSFSGSGRGVSTSIAM----- 750

Query: 62   DSSSPASIDLSGTALPFRTD 3
             S S  + D S    PFRTD
Sbjct: 751  -SGSLTNADTSAVVTPFRTD 769


>ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  102 bits (255), Expect = 4e-20
 Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
 Frame = -3

Query: 590  AATVTSS-EKPTSLPDXXXXXXXXXXXXXXXXXXXXXEIRXXXXXXXXXXXXKMSNVLTM 414
            AAT+TSS EKP SL D                     EI+            KM+NVL+M
Sbjct: 642  AATITSSVEKPASLHDAVQAAATAALAAEKKEKEKAKEIKLASKSSILANKKKMNNVLSM 701

Query: 413  WKQRSHEGQAPRLALDDKQNPS--AEDKVNAIGSSSKGKPKIEAVTMKENTVNTSGISTS 240
            WKQRSHEGQA R+ALDD  +PS  A+D++ + G S+K K K ++ T KENT+++SG++ +
Sbjct: 702  WKQRSHEGQATRVALDD-SHPSVPADDRLFSAGQSTKSKFKSDSTTTKENTMSSSGVAAT 760

Query: 239  TPVQSSGLDSQERLKP--XXXXXXXXXXXXXXXXXXVKSDTSYSGQSGITSTSLSASVGA 66
               Q++GL+S  + +P                    VKSDTSYS  S   STS +A++  
Sbjct: 761  PSAQTTGLESPVKPRPASNSSGGTLMGVIRGSGRGVVKSDTSYSIPSAGVSTS-NAAIPL 819

Query: 65   VDSSSPASIDLSGTALPFRTD 3
              + S  + D    A PFRTD
Sbjct: 820  TMAGSSTNSDTFPAATPFRTD 840


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 59/126 (46%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
 Frame = -3

Query: 590  AATVTSSEKPTSLPDXXXXXXXXXXXXXXXXXXXXXEIRXXXXXXXXXXXXKMSNVLTMW 411
            AAT+TS+EK  SLPD                     EI+            KMSNVLTMW
Sbjct: 683  AATITSNEKAASLPDAVQAAATAAMAAEKKEKEKLKEIKLASKSSILANKKKMSNVLTMW 742

Query: 410  KQRSHEGQAPRLALDDKQNPSA--EDKVNAIGSSSKGKPKIEAVTMKENTVNTSGISTST 237
            KQRSHEGQA R+ALDD Q PSA  +D+ N+IG S KGK + + VT KE+T  + G +TST
Sbjct: 743  KQRSHEGQATRVALDDNQ-PSAAVDDRPNSIGPSPKGKFRTDVVTTKEHTAASGGFTTST 801

Query: 236  PVQSSG 219
            P  + G
Sbjct: 802  PALTVG 807


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