BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017343
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524071.1| ribonucleoprotein, chloroplast, putative [Ri...    71   1e-10
ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    67   2e-09
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    66   3e-09
ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata...    65   5e-09
ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis...    65   9e-09

>ref|XP_002524071.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223536639|gb|EEF38281.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 107

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/56 (57%), Positives = 44/56 (78%)
 Frame = +1

Query: 4   SGRSQGYGFITFESAESVESALNELNGVDVEGRVMRLNMAEDRARRKPPPRESFEN 171
           +GRS+G+GF++FESAE  E+ALN +NGV+VEGR +RLN+A DRAR  P    + E+
Sbjct: 39  TGRSRGFGFVSFESAEDAEAALNSMNGVEVEGRPLRLNLAADRARTPPAVESNAED 94


>ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 298

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = +1

Query: 4   SGRSQGYGFITFESAESVESALNELNGVDVEGRVMRLNMAEDRARRKP 147
           SGRS+GYGF++FE+AE VE+ALN +NGV+V+GR +RLN+A D+    P
Sbjct: 224 SGRSRGYGFVSFETAEDVEAALNSMNGVEVQGRPLRLNLATDKNTSSP 271


>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 314

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/49 (59%), Positives = 42/49 (85%)
 Frame = +1

Query: 4   SGRSQGYGFITFESAESVESALNELNGVDVEGRVMRLNMAEDRARRKPP 150
           SGRS+G+GF++FE+AES ++AL+ +NGV+V+GR +RLN+AE RA   PP
Sbjct: 245 SGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEARAPSSPP 293


>ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
           gi|297321979|gb|EFH52400.1| RNA-binding protein cp33
           [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   SGRSQGYGFITFESAESVESALNELNGVDVEGRVMRLNMAEDRARR--KPPPRESFE 168
           +GRS+G+GFI+FESAE V+SAL  +NGV+VEGR +RLN+A +R R    PP  E  E
Sbjct: 257 TGRSRGFGFISFESAEDVQSALATMNGVEVEGRALRLNLASERERPTVSPPSVEEGE 313


>ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
           gi|681910|dbj|BAA06522.1| RNA-binding protein cp33
           [Arabidopsis thaliana] gi|4886289|emb|CAB43448.1|
           RNA-binding protein cp33 precursor [Arabidopsis
           thaliana] gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240
           [Arabidopsis thaliana] gi|18700226|gb|AAL77723.1|
           AT3g52380/F22O6_240 [Arabidopsis thaliana]
           gi|21553418|gb|AAM62511.1| RNA-binding protein cp33
           [Arabidopsis thaliana] gi|332645419|gb|AEE78940.1|
           chloroplast RNA-binding protein 33 [Arabidopsis
           thaliana]
          Length = 329

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   SGRSQGYGFITFESAESVESALNELNGVDVEGRVMRLNMAEDRARR--KPPPRESFE 168
           +GRS+G+GFI+FESAE+V+SAL  +NGV+VEGR +RLN+A +R +    PP  E  E
Sbjct: 256 TGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREKPTVSPPSVEEGE 312