BLASTX nr result

ID: Cnidium21_contig00017337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017337
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527329.1| ATP-binding cassette transporter, putative [...    85   5e-23
ref|XP_002514350.1| ATP-binding cassette transporter, putative [...    85   3e-22
emb|CBI36229.3| unnamed protein product [Vitis vinifera]               84   4e-22
emb|CAN61052.1| hypothetical protein VITISV_026320 [Vitis vinifera]    84   8e-22
ref|XP_003632876.1| PREDICTED: pleiotropic drug resistance prote...    84   8e-22

>ref|XP_002527329.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533329|gb|EEF35081.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1434

 Score = 85.1 bits (209), Expect(2) = 5e-23
 Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 35/105 (33%)
 Frame = -2

Query: 287 LTTNKYGVGKME-----------------------------------TLFLRTEMHRDLV 213
           L+T +YGVGKME                                   T+FLRTEM +D V
Sbjct: 492 LSTKRYGVGKMELFKACFAREYLLMKRNSFVFIFKLCQLLVMAFIGTTVFLRTEMSKDTV 551

Query: 212 NDGSIYMGALFFTVSTIMFNRMP*MYMTIAKLPVFCKQKDLLFFP 78
            DG+IY GALFF++ T+MFN M  + MTIAKLPVF KQ+DLLFFP
Sbjct: 552 TDGNIYTGALFFSLITVMFNGMSELSMTIAKLPVFYKQRDLLFFP 596



 Score = 47.4 bits (111), Expect(2) = 5e-23
 Identities = 16/26 (61%), Positives = 23/26 (88%)
 Frame = -1

Query: 84  FSPWSYALPSWIIKIPISFIEAFIWV 7
           F PW+Y++PSWI+KIPI+F+E  +WV
Sbjct: 595 FPPWAYSIPSWILKIPITFLEVGVWV 620


>ref|XP_002514350.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223546806|gb|EEF48304.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1449

 Score = 84.7 bits (208), Expect(2) = 3e-22
 Identities = 40/58 (68%), Positives = 47/58 (81%)
 Frame = -2

Query: 251 TLFLRTEMHRDLVNDGSIYMGALFFTVSTIMFNRMP*MYMTIAKLPVFCKQKDLLFFP 78
           TLFLRTEMHR+   DG +Y+GALFFTV+TIMFN    + MTI KLPVF KQ+DLLF+P
Sbjct: 538 TLFLRTEMHRNTETDGGVYLGALFFTVTTIMFNGFSELAMTILKLPVFYKQRDLLFYP 595



 Score = 45.1 bits (105), Expect(2) = 3e-22
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = -1

Query: 84  FSPWSYALPSWIIKIPISFIEAFIWVL 4
           +  W+YALP+WI+KIPI+F+E  +WV+
Sbjct: 594 YPSWAYALPTWILKIPITFVEVAVWVV 620


>emb|CBI36229.3| unnamed protein product [Vitis vinifera]
          Length = 3142

 Score = 82.0 bits (201), Expect(2) = 4e-22
 Identities = 40/58 (68%), Positives = 47/58 (81%)
 Frame = -2

Query: 251  TLFLRTEMHRDLVNDGSIYMGALFFTVSTIMFNRMP*MYMTIAKLPVFCKQKDLLFFP 78
            T+FLRTEMH++  +DGSIY GALFFTV  IMFN M  + MTIAKLPVF KQ+ LLF+P
Sbjct: 2227 TIFLRTEMHKNSTDDGSIYTGALFFTVVMIMFNGMSELAMTIAKLPVFYKQRGLLFYP 2284



 Score = 47.4 bits (111), Expect(2) = 4e-22
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -1

Query: 99   KGPFVFSPWSYALPSWIIKIPISFIEAFIWV 7
            +G   +  W+YALPSWI+KIPI+F+E  +WV
Sbjct: 2278 RGLLFYPAWAYALPSWILKIPITFVEVAVWV 2308



 Score = 84.0 bits (206), Expect(2) = 7e-22
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 251 TLFLRTEMHRDLVNDGSIYMGALFFTVSTIMFNRMP*MYMTIAKLPVFCKQKDLLFFP 78
           TLFLRTEMH++ V+DG+IY GALFFTV  IMFN M  + M IAKLPVF KQ+DLLF+P
Sbjct: 538 TLFLRTEMHKNSVDDGNIYTGALFFTVVMIMFNGMAELAMAIAKLPVFYKQRDLLFYP 595



 Score = 44.7 bits (104), Expect(2) = 7e-22
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 84  FSPWSYALPSWIIKIPISFIEAFIWV 7
           +  W+YALP+WI+KIPI+FIE  +WV
Sbjct: 594 YPAWAYALPTWILKIPITFIEVGVWV 619


>emb|CAN61052.1| hypothetical protein VITISV_026320 [Vitis vinifera]
          Length = 1477

 Score = 84.0 bits (206), Expect(2) = 8e-22
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 251 TLFLRTEMHRDLVNDGSIYMGALFFTVSTIMFNRMP*MYMTIAKLPVFCKQKDLLFFP 78
           TLFLRTEMH++ V+DG+IY GALFFTV  IMFN M  + M IAKLPVF KQ+DLLF+P
Sbjct: 572 TLFLRTEMHKNSVDDGNIYTGALFFTVVMIMFNGMAELAMAIAKLPVFYKQRDLLFYP 629



 Score = 44.7 bits (104), Expect(2) = 8e-22
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 84  FSPWSYALPSWIIKIPISFIEAFIWV 7
           +  W+YALP+WI+KIPI+FIE  +WV
Sbjct: 628 YPAWAYALPTWILKIPITFIEVGVWV 653


>ref|XP_003632876.1| PREDICTED: pleiotropic drug resistance protein 1 isoform 3 [Vitis
           vinifera]
          Length = 1445

 Score = 84.0 bits (206), Expect(2) = 8e-22
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 251 TLFLRTEMHRDLVNDGSIYMGALFFTVSTIMFNRMP*MYMTIAKLPVFCKQKDLLFFP 78
           TLFLRTEMH++ V+DG+IY GALFFTV  IMFN M  + M IAKLPVF KQ+DLLF+P
Sbjct: 538 TLFLRTEMHKNSVDDGNIYTGALFFTVVMIMFNGMAELAMAIAKLPVFYKQRDLLFYP 595



 Score = 44.7 bits (104), Expect(2) = 8e-22
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 84  FSPWSYALPSWIIKIPISFIEAFIWV 7
           +  W+YALP+WI+KIPI+FIE  +WV
Sbjct: 594 YPAWAYALPTWILKIPITFIEVGVWV 619


Top