BLASTX nr result

ID: Cnidium21_contig00017305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017305
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
emb|CBI15634.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis ...    94   2e-17
ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis...    93   3e-17
ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
 Frame = +1

Query: 169 LPVFMLFESSCGYVLFRAHDVYKVERNYVATEEYIKS---FDKSFEFIACHTFESSDDAL 339
           + +++L+E+S GY LF+A+ + ++ +N  A    +     F K  +  A H FES+ DAL
Sbjct: 1   MALYLLYETSSGYSLFQANGIDEIGQNTEAVRNSVSDLNRFGKVVQLTAFHPFESALDAL 60

Query: 340 MYLIADCNDTLPEKLMEFLVLHLPPAMEGDEHCYSLALSNPLMADDIVSNAKIACSASQF 519
             + +     + ++L  FL L+LP   EG +  +SL ++ P +   I    K+ C ++ F
Sbjct: 61  NQINSVSEGIMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKLPCQSNDF 120

Query: 520 HNEIFRGVRMNIEKFFKNMKPGDL 591
            +E+ RGVR++ E+F K++KPGDL
Sbjct: 121 VHELLRGVRLHFERFIKDLKPGDL 144


>emb|CBI15634.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
 Frame = +1

Query: 169 LPVFMLFESSCGYVLFRAHDVYKVERNYVATEEYIKS---FDKSFEFIACHTFESSDDAL 339
           + +++L+ES+ GY LF AH + ++ +N  A    +     F K  +  A H FES+ DAL
Sbjct: 1   MALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDAL 60

Query: 340 MYLIADCNDTLPEKLMEFLVLHLPPAMEGDEHCYSLALSNPLMADDIVSNAKIACSASQF 519
               +     + ++L  FL L+LP   EG +  +SL  + P +   I  + KI C +++F
Sbjct: 61  NQCNSVSEGLMTDELRSFLELNLPKVKEGKKPKFSLGTAEPKIGSHIFEDTKIPCQSNEF 120

Query: 520 HNEIFRGVRMNIEKFFKNMKPGDL 591
             E+ RGVR++ ++F K++KPGDL
Sbjct: 121 VLELLRGVRLHFDRFIKDLKPGDL 144


>ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis vinifera]
          Length = 558

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
 Frame = +1

Query: 169 LPVFMLFESSCGYVLFRAHDVYKVERNYVATEEYIKS---FDKSFEFIACHTFESSDDAL 339
           + +++L+ES+ GY LF AH + ++ +N  A    +     F K  +  A H FES+ DAL
Sbjct: 1   MALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDAL 60

Query: 340 MYLIADCNDTLPEKLMEFLVLHLPPAMEGDEHCYSLALSNPLMADDIVSNAKIACSASQF 519
               +     + ++L  FL L+LP   EG +  +SL  + P +   I  + KI C +++F
Sbjct: 61  NQCNSVSEGLMTDELRSFLELNLPKVKEGKKPKFSLGTAEPKIGSHIFEDTKIPCQSNEF 120

Query: 520 HNEIFRGVRMNIEKFFKNMKPGDL 591
             E+ RGVR++ ++F K++KPGDL
Sbjct: 121 VLELLRGVRLHFDRFIKDLKPGDL 144


>ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis thaliana]
           gi|6056371|gb|AAF02835.1|AC009894_6 nucleolar protein
           [Arabidopsis thaliana]
           gi|11878189|gb|AAG40838.1|AF302492_1 NOP56-like protein
           [Arabidopsis thaliana] gi|14517412|gb|AAK62596.1|
           At1g56110/T6H22_9 [Arabidopsis thaliana]
           gi|20857405|gb|AAM26718.1| At1g56110/T6H22_9
           [Arabidopsis thaliana] gi|21592692|gb|AAM64641.1| SAR
           DNA binding protein, putative [Arabidopsis thaliana]
           gi|332195224|gb|AEE33345.1| homolog of nucleolar protein
           NOP56 [Arabidopsis thaliana]
          Length = 522

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
 Frame = +1

Query: 169 LPVFMLFESSCGYVLFRAHDVYKVERNYVATEEYIKS---FDKSFEFIACHTFESSDDAL 339
           + +++++ESS GY LF  H + ++ +N  A    +     F +  +  A H FES+ DAL
Sbjct: 1   MAMYVIYESSSGYGLFEVHGLDEIGQNTEAVRTSVSDLSRFGRVVQLTAFHPFESALDAL 60

Query: 340 MYLIADCNDTLPEKLMEFLVLHLPPAMEGDEHCYSLALSNPLMADDIVSNAKIACSASQF 519
             + A     + ++L  FL L+LP   EG +  +SL L+ P +   I    KI C +++F
Sbjct: 61  NQVNAVSEGVMTDELRSFLELNLPKVKEGKKPKFSLGLAEPKLGSHIFEATKIPCQSNEF 120

Query: 520 HNEIFRGVRMNIEKFFKNMKPGDL 591
             E+ RGVR + ++F K++KPGDL
Sbjct: 121 VLELLRGVRQHFDRFIKDLKPGDL 144


>ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|222859388|gb|EEE96935.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
 Frame = +1

Query: 169 LPVFMLFESSCGYVLFRAHDVYKVERNYVATEEYIKS---FDKSFEFIACHTFESSDDAL 339
           + +F+L+E+S GY LF A+ + ++ +N  A    +     F K  +  A H FES+ DAL
Sbjct: 1   MALFLLYETSSGYSLFVANGLDEIGQNTEAVRNSVSDLNRFGKVVQLTAFHPFESALDAL 60

Query: 340 MYLIADCNDTLPEKLMEFLVLHLPPAMEGDEHCYSLALSNPLMADDIVSNAKIACSASQF 519
               +     + ++L  FL L+LP   EG +  +SL ++ P +   I    KI C +++F
Sbjct: 61  NQCNSVSEGIMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKIPCQSNEF 120

Query: 520 HNEIFRGVRMNIEKFFKNMKPGDL 591
            +E+ RGVR++ E+F K++KPGDL
Sbjct: 121 VHELLRGVRLHFERFIKDLKPGDL 144


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