BLASTX nr result

ID: Cnidium21_contig00017291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017291
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV59369.1| GAGA-binding transcriptional activator [Artemisia...   118   4e-25
gb|ADV59371.1| GAGA-binding transcriptional activator [Cichorium...   116   2e-24
ref|XP_002314755.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
gb|ABV53916.1| GAGA-motif binding transcriptional activator [Pop...   115   3e-24
gb|ADV59367.1| GAGA-binding transcriptional activator [Artemisia...   115   4e-24

>gb|ADV59369.1| GAGA-binding transcriptional activator [Artemisia annua]
          Length = 298

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +3

Query: 3   MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASENFNFTNAIDLRYHWARHGTNKFVTI 182
           MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASE++NF NAIDLR HWA+HGTNKFVTI
Sbjct: 238 MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASESYNFANAIDLRLHWAKHGTNKFVTI 297

Query: 183 R 185
           R
Sbjct: 298 R 298


>gb|ADV59371.1| GAGA-binding transcriptional activator [Cichorium intybus]
          Length = 247

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +3

Query: 3   MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASENFNFTNAIDLRYHWARHGTNKFVTI 182
           MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL SE++NF NAIDLR HWA+HGTNKFVTI
Sbjct: 187 MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLGSESYNFANAIDLRAHWAKHGTNKFVTI 246

Query: 183 R 185
           R
Sbjct: 247 R 247


>ref|XP_002314755.1| predicted protein [Populus trichocarpa] gi|222863795|gb|EEF00926.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/61 (90%), Positives = 57/61 (93%)
 Frame = +3

Query: 3   MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASENFNFTNAIDLRYHWARHGTNKFVTI 182
           MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLA+E +NF N IDLR HWARHGTNKFVTI
Sbjct: 219 MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTI 278

Query: 183 R 185
           R
Sbjct: 279 R 279


>gb|ABV53916.1| GAGA-motif binding transcriptional activator [Populus trichocarpa]
          Length = 279

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/61 (90%), Positives = 57/61 (93%)
 Frame = +3

Query: 3   MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASENFNFTNAIDLRYHWARHGTNKFVTI 182
           MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLA+E +NF N IDLR HWARHGTNKFVTI
Sbjct: 219 MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTI 278

Query: 183 R 185
           R
Sbjct: 279 R 279


>gb|ADV59367.1| GAGA-binding transcriptional activator [Artemisia annua]
          Length = 293

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +3

Query: 3   MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASENFNFTNAIDLRYHWARHGTNKFVTI 182
           MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASE +NF NAIDLR +WA+HGTNKFVTI
Sbjct: 233 MYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASEGYNFANAIDLRTYWAKHGTNKFVTI 292

Query: 183 R 185
           R
Sbjct: 293 R 293


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