BLASTX nr result

ID: Cnidium21_contig00017285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017285
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear...   641   0.0  
emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]    636   e-180
sp|O82797.1|PCNA_TOBAC RecName: Full=Proliferating cell nuclear ...   476   e-132
gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nic...   475   e-131
gb|ADA70357.1| proliferation cell nuclear antigen [Persea americ...   474   e-131

>sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear antigen large form;
            Short=PCNA; AltName: Full=Cyclin
          Length = 365

 Score =  641 bits (1654), Expect = 0.0
 Identities = 331/365 (90%), Positives = 341/365 (93%), Gaps = 3/365 (0%)
 Frame = +2

Query: 179  MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 358
            MLELRLVQG LLKKVLESIKDLVNDANFDCSA+GFSLQAMDSSHVALVA+LLRSEGFEHY
Sbjct: 1    MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 359  RCDRNISMGMNLGNMAKMLRCAGNDDIVTIKADDGGDVITFMFESPTQDKISDFEMKLMD 538
            RCDRNISMGMNLGNMAKMLRCAGNDDIVT+KADD GDVITFMFESPTQDKISDFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 539  IDSEHLGIPESEYEAIVRMPSAEFSRICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 718
            IDSEHLGIPESEYEAIVRMPSAEF+RICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI
Sbjct: 121  IDSEHLGIPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 719  VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFAKATPLANQVTISLSSELPVVVEYK 898
            VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSF KATPLANQVTISLSSELPVVVEYK
Sbjct: 181  VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYK 240

Query: 899  IAEMGYIRYYLAPKIEEEDEAANYAQPAQNSTAAATSKNGTKKNDEGN---SKTRAVKSE 1069
            IAEMGYIRYYLAPKIEEEDEAANYAQPAQNS AAATS NGTKKN+  N   SK RA+KSE
Sbjct: 241  IAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKNEGNNKVDSKKRAIKSE 300

Query: 1070 LVDDSEAAINIKPKTKTKTEAGAGADDDVEVMDTKPKTETDDDIEVMGTKPKTESNGEVE 1249
             VDDSEAA + +P+ K KT+  AG DDDVEVMDTKPK E DD  EVM TKPKTESNGEVE
Sbjct: 301  FVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETKPKTESNGEVE 360

Query: 1250 VMDIE 1264
            VMDIE
Sbjct: 361  VMDIE 365


>emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]
          Length = 367

 Score =  636 bits (1641), Expect = e-180
 Identities = 331/367 (90%), Positives = 341/367 (92%), Gaps = 5/367 (1%)
 Frame = +2

Query: 179  MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 358
            MLELRLVQG LLKKVLESIKDLVNDANFDCSA+GFSLQAMDSSHVALVA+LLRSEGFEHY
Sbjct: 1    MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 359  RCDRNISMGMNLGNMAKMLRCAGNDDIVTIKADDGGDVITFMFESPTQDKISDFEMKLMD 538
            RCDRNISMGMNLGNMAKMLRCAGNDDIVT+KADD GDVITFMFESPTQDKISDFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 539  IDSEHLGIPESEYE--AIVRMPSAEFSRICKDLSTIGDTVVISVTKEGVKFSTRGDIGTA 712
            IDSEHLGIPESEYE  AIVRMPSAEF+RICKDLSTIGDTVVISVTKEGVKFSTRGDIGTA
Sbjct: 121  IDSEHLGIPESEYEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTA 180

Query: 713  NIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFAKATPLANQVTISLSSELPVVVE 892
            NIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSF KATPLANQVTISLSSELPVVVE
Sbjct: 181  NIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVE 240

Query: 893  YKIAEMGYIRYYLAPKIEEEDEAANYAQPAQNSTAAATSKNGTKKNDEGN---SKTRAVK 1063
            YKIAEMGYIRYYLAPKIEEEDEAANYAQPAQNS AAATS NGTKKN+  N   SK RA+K
Sbjct: 241  YKIAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKNEGNNKVDSKKRAIK 300

Query: 1064 SELVDDSEAAINIKPKTKTKTEAGAGADDDVEVMDTKPKTETDDDIEVMGTKPKTESNGE 1243
            SE VDDSEAA + +P+ K KT+  AG DDDVEVMDTKPK E DD  EVM TKPKTESNGE
Sbjct: 301  SEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETKPKTESNGE 360

Query: 1244 VEVMDIE 1264
            VEVMDIE
Sbjct: 361  VEVMDIE 367


>sp|O82797.1|PCNA_TOBAC RecName: Full=Proliferating cell nuclear antigen; Short=PCNA
           gi|3366661|gb|AAC27992.1| proliferating cell nuclear
           antigen [Nicotiana tabacum] gi|3514105|gb|AAC34126.1|
           proliferating cell nuclear antigen [Nicotiana tabacum]
           gi|4586306|dbj|BAA76349.1| proliferating cell nuclear
           antigen [Nicotiana tabacum]
          Length = 264

 Score =  476 bits (1224), Expect = e-132
 Identities = 237/260 (91%), Positives = 252/260 (96%)
 Frame = +2

Query: 179 MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 358
           MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 359 RCDRNISMGMNLGNMAKMLRCAGNDDIVTIKADDGGDVITFMFESPTQDKISDFEMKLMD 538
           RCDRNISMGMNL NMAKML+CAGNDDI+T+KADDG D +TFMFESPTQDKI+DFEMKLMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 539 IDSEHLGIPESEYEAIVRMPSAEFSRICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 718
           IDSEHLGIPE+EY AIVRMPSAEFSRICKDLS+IGDTVVISVTKEGVKFSTRGDIGTANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 719 VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFAKATPLANQVTISLSSELPVVVEYK 898
           VCRQNT+VDKPE+AT+IEM E VSLTFALRY+NSF KATPL+N VTISLSSELPVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 899 IAEMGYIRYYLAPKIEEEDE 958
           IAEMGYIR+YLAPKIEE++E
Sbjct: 241 IAEMGYIRFYLAPKIEEDEE 260


>gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nicotiana benthamiana]
          Length = 264

 Score =  475 bits (1222), Expect = e-131
 Identities = 235/260 (90%), Positives = 253/260 (97%)
 Frame = +2

Query: 179 MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 358
           MLELRLVQGSLLKKVLESIK+LVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 359 RCDRNISMGMNLGNMAKMLRCAGNDDIVTIKADDGGDVITFMFESPTQDKISDFEMKLMD 538
           RCDRNISMGMNLGNMAKML+CAGNDDI+T+KADDG D +TFMFESPTQDKI+DFEMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 539 IDSEHLGIPESEYEAIVRMPSAEFSRICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 718
           IDSEHLGIPE+EY AIVRMPSAEF+RICKDLS+IGDTVVISVTKEGVKFSTRGDIGTAN+
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANV 180

Query: 719 VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFAKATPLANQVTISLSSELPVVVEYK 898
           VCRQNT+VDKPE+AT+IEM E VSLTFALRY+NSF KATPL+N VTISLSSELPVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 899 IAEMGYIRYYLAPKIEEEDE 958
           IAEMGYIR+YLAPKIEE++E
Sbjct: 241 IAEMGYIRFYLAPKIEEDEE 260


>gb|ADA70357.1| proliferation cell nuclear antigen [Persea americana]
          Length = 290

 Score =  474 bits (1220), Expect = e-131
 Identities = 241/287 (83%), Positives = 258/287 (89%), Gaps = 1/287 (0%)
 Frame = +2

Query: 179  MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 358
            MLELRLVQGSLLKKVLES+KDLV DANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESVKDLVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 359  RCDRNISMGMNLGNMAKMLRCAGNDDIVTIKADDGGDVITFMFESPTQDKISDFEMKLMD 538
            RCDRN+SMGMNL NM+KML+CAGNDDI+TIKADDG D +TFMFESPTQDKI+DFEMKLMD
Sbjct: 61   RCDRNLSMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 539  IDSEHLGIPESEYEAIVRMPSAEFSRICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 718
            IDSEHLGIPE+EY AIVRMPSAEF+RICKDLS+IGDTVVISVTKEGVKFSTRGDIGTANI
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 719  VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFAKATPLANQVTISLSSELPVVVEYK 898
            VCRQNTSVDKPE++TIIEM E VSLTFALRYMNSF KATPLAN VTISLSSELPVVVEYK
Sbjct: 181  VCRQNTSVDKPEESTIIEMNEPVSLTFALRYMNSFTKATPLANSVTISLSSELPVVVEYK 240

Query: 899  IAEMGYIRYYLAPKIEEEDEAAN-YAQPAQNSTAAATSKNGTKKNDE 1036
            IAEMGYIR+YLAPKIE+++E     AQP     A    K   +   E
Sbjct: 241  IAEMGYIRFYLAPKIEDDEEGMQAEAQPPPEKKAKKEPKAEAEAKSE 287


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