BLASTX nr result

ID: Cnidium21_contig00017282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017282
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]   187   2e-45
ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus ...   187   3e-45
ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitocho...   187   3e-45
ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitocho...   185   1e-44
ref|XP_002310235.1| predicted protein [Populus trichocarpa] gi|1...   182   1e-43

>emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]
          Length = 102

 Score =  187 bits (476), Expect = 2e-45
 Identities = 90/93 (96%), Positives = 92/93 (98%)
 Frame = -1

Query: 722 MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKQNVVCCTGI 543
           MEAKFFRFLKIVGVGFKARAESEGRLL+LKLGYSHEVELTVPPAVRVFCFK NVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGI 60

Query: 542 DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 444
           DKQRVHQFAAAVRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus communis]
           gi|223533110|gb|EEF34868.1| 50S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 102

 Score =  187 bits (475), Expect = 3e-45
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = -1

Query: 722 MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKQNVVCCTGI 543
           MEAKFFRFLKIVGVG+KARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFK NVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 542 DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 444
           DKQRVHQFAA+VRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKQRVHQFAASVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitochondrial [Vitis vinifera]
           gi|297735153|emb|CBI17515.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  187 bits (475), Expect = 3e-45
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = -1

Query: 722 MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKQNVVCCTGI 543
           MEAKFFRFLKIVGVGFKARAESEGRLL+LKLGYSHEVELTVPPAVRVFCFK N+VCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGFKARAESEGRLLFLKLGYSHEVELTVPPAVRVFCFKPNIVCCTGI 60

Query: 542 DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 444
           DKQRVHQFAAAVRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis
           sativus] gi|449496483|ref|XP_004160146.1| PREDICTED: 60S
           ribosomal protein L6, mitochondrial-like [Cucumis
           sativus]
          Length = 102

 Score =  185 bits (470), Expect = 1e-44
 Identities = 89/93 (95%), Positives = 91/93 (97%)
 Frame = -1

Query: 722 MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKQNVVCCTGI 543
           MEAKFFRFLKIVGVG+KARAE+ GRLLYLKLGYSHEVELTVPPAVRVFCFK NVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 542 DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 444
           DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 93


>ref|XP_002310235.1| predicted protein [Populus trichocarpa] gi|118485475|gb|ABK94593.1|
           unknown [Populus trichocarpa]
           gi|118486815|gb|ABK95242.1| unknown [Populus
           trichocarpa] gi|222853138|gb|EEE90685.1| predicted
           protein [Populus trichocarpa]
          Length = 102

 Score =  182 bits (461), Expect = 1e-43
 Identities = 86/93 (92%), Positives = 91/93 (97%)
 Frame = -1

Query: 722 MEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKQNVVCCTGI 543
           MEAKFFRFLKIVGVG+KARAE+EGRLL+LKLGYSHEVELTVPPAVRVFCFK NVVCCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAEGRLLFLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 542 DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 444
           DK RVHQFAA+VRSCKPPEVYKGKGIMY+DEVI
Sbjct: 61  DKGRVHQFAASVRSCKPPEVYKGKGIMYIDEVI 93


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