BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017276
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   480   e-133
ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...   478   e-132
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...   476   e-132
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   472   e-130
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   471   e-130

>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 395

 Score =  480 bits (1236), Expect = e-133
 Identities = 247/392 (63%), Positives = 304/392 (77%), Gaps = 2/392 (0%)
 Frame = +3

Query: 111  MAARSIFTALTRN--LRKERNILRPFSSEATKAQIVYEQEPSADQESVDDLKSRIFTVRL 284
            MA  S+F +L RN  L    N  R  SS A  + +V E     D    DDL+SRIF +RL
Sbjct: 1    MAHCSLFLSLRRNSGLACLLNRTRFVSSGAVSSDLVEESVEGVD----DDLRSRIFRLRL 56

Query: 285  PKRSVTNVLQNWVNEGHQITISDLRKITRELRQSQRFKHALELSEWMIAHDEREMLDSDY 464
            PKRS TNVLQ WV +G+ +T+S LR I++ELR+SQR+KHALE+SEWM++H+E E+ DSDY
Sbjct: 57   PKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSDSDY 116

Query: 465  AVRIDLMTKVFGVDAAERYFESLPPSAKTSETYTSLLHCYAVLKLTEKAEQLYRRIKESN 644
            A RIDL TKVFG+DAAERYFE LP + KT+ETYT+LLH YA  KLT+KAE+LY+RIK+SN
Sbjct: 117  AARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSN 176

Query: 645  LSLTALTYNELMTLYISVGQVEKVSTVVEDLKCQNIAPDLFTYNLWVSAHAAALKIDEVR 824
            LS  ALTYNE+MTLY+SVGQ EKV +VVE+LK Q ++PD+FTYNLW+S  AA L IDEVR
Sbjct: 177  LSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVR 236

Query: 825  RILDEMSHDPSFNDDWARYVKLAKIYLSSGNLVNSETNSVVESEKGITQRELITYDFLII 1004
            RILDEMSH    N+ W RY+ LA IY+S G+L N+ +N++VE+EK ITQR+ ITYDFLII
Sbjct: 237  RILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYDFLII 296

Query: 1005 LYGGLGNKDKLDQIWKSLRMTKQKMTSRNYLCILSSYLMLGNLKEVEEVIDQWKLSATTE 1184
            LYGGLG+KDKLDQIW SLRMTKQKM SRNY+CI+SSYLMLG+ KEV EVIDQWK S TT+
Sbjct: 297  LYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWKQSTTTD 356

Query: 1185 FHDSTCRSLSKAFAERGLQDKAAALSMLLTEE 1280
            F    C+ +  AF + GL + A  L+M+L E+
Sbjct: 357  FDMLACKKIMVAFRDMGLAEIANNLNMILIEK 388


>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score =  478 bits (1231), Expect = e-132
 Identities = 250/416 (60%), Positives = 306/416 (73%), Gaps = 10/416 (2%)
 Frame = +3

Query: 60   IQTTPYFSSLHNTYRAEMAARSIFTALTRNLRKERNI----------LRPFSSEATKAQI 209
            ++ +  F   +   RA MA+RS    L R  R    I             F S  T    
Sbjct: 2    LEHSAIFLKTNEVKRAVMASRSFLFNLQRICRINSGIGSLSNSKKWEFNHFLSSGTLRNE 61

Query: 210  VYEQEPSADQESVDDLKSRIFTVRLPKRSVTNVLQNWVNEGHQITISDLRKITRELRQSQ 389
            V  +E S+ +E  DDLKSRIF +RLPKRS TN++ NWV+EG+ +T S+LR I+ ELR+ Q
Sbjct: 62   VLAEE-SSSKEIEDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQ 120

Query: 390  RFKHALELSEWMIAHDEREMLDSDYAVRIDLMTKVFGVDAAERYFESLPPSAKTSETYTS 569
            R+KHALE+SEWM+ + E E++D DYA RIDLMTKVFG+DAAERYFE LP + KTSETYT+
Sbjct: 121  RYKHALEISEWMVTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTA 180

Query: 570  LLHCYAVLKLTEKAEQLYRRIKESNLSLTALTYNELMTLYISVGQVEKVSTVVEDLKCQN 749
            LLH YA +K   KAE+LY RIK SNLS TALTYNE+MTLY+SVGQVEKVS VVE+LK Q 
Sbjct: 181  LLHSYAGVKQLGKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQK 240

Query: 750  IAPDLFTYNLWVSAHAAALKIDEVRRILDEMSHDPSFNDDWARYVKLAKIYLSSGNLVNS 929
            IAPD+FTYNLW+S+ AA L ID+V RILDEM HD   NDDW RY+ +A IY+ +G+LVN+
Sbjct: 241  IAPDIFTYNLWISSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNT 300

Query: 930  ETNSVVESEKGITQRELITYDFLIILYGGLGNKDKLDQIWKSLRMTKQKMTSRNYLCILS 1109
            E+++VVE+EK ITQRE ITYDFLIILY GL +KDK+DQIWKSLRMTKQKMT+RN++CILS
Sbjct: 301  ESSAVVEAEKSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILS 360

Query: 1110 SYLMLGNLKEVEEVIDQWKLSATTEFHDSTCRSLSKAFAERGLQDKAAALSMLLTE 1277
            SY+MLG+LKE  EV+DQWK S TT+F  S C  L  AF+  GL + A    MLL E
Sbjct: 361  SYMMLGHLKEAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIE 416


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial [Vitis vinifera]
          Length = 396

 Score =  476 bits (1226), Expect = e-132
 Identities = 246/399 (61%), Positives = 308/399 (77%), Gaps = 1/399 (0%)
 Frame = +3

Query: 111  MAARSIFTALTRNLRKERNILRPFSSEATKAQIVYEQEPSADQESVDDLKSRIFTVRLPK 290
            M  RS+F  LTR    E+   R  SS   +++++ E+ P++ +   DDLKSRIF +RLPK
Sbjct: 1    MGTRSLFLGLTRQCISEKFAFRLLSSRTLRSEVL-EESPNSPEN--DDLKSRIFKLRLPK 57

Query: 291  RSVTNVLQNWVNEGHQITISDLRKITRELRQSQRFKHALELSEWMIAHDEREMLDSDYAV 470
            RSVTNVLQ W+ EG+Q+ IS+LR I++ELR++QR+KHALE+SEWM++HDE E+ DSD AV
Sbjct: 58   RSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDNAV 117

Query: 471  RIDLMTKVFGVDAAERYFESLPPSAKTSETYTSLLHCYAVLKLTEKAEQLYRRIKESNLS 650
            RIDLMT+VFG+DAAERYFE LP +AKTSETYT+LLH YA  KL EKAE+LY RIKESN+ 
Sbjct: 118  RIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVP 177

Query: 651  LTALTYNELMTLYISVGQVEKVSTVVEDLKCQNIAPDLFTYNLWVSAHAAALKIDEVRRI 830
            L  L YNE+MTLY+SVGQVEKVS VVE+LK Q + PDLFTYNLWVS+ AA L ID VRRI
Sbjct: 178  LNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRI 237

Query: 831  LDEMSHDPSFNDDWARYVKLAKIYLSSGNLVNSETNSVVESEKGITQRELITYDFLIILY 1010
            L EMS++ S ND W RY  LA IY+ +G+LVNS +NSVVE+    TQR+ ITYDFLIILY
Sbjct: 238  LKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQRDWITYDFLIILY 297

Query: 1011 GGLGNKDKLDQIWKSLRMTKQKMTSRNYLCILSSYLMLGNLKEVEEVIDQWKLSATTEFH 1190
             GLGNKDK+DQIWKSL+MTKQK+ SR+Y+CILSSY+MLG++K+V  VID+WK S TT+F 
Sbjct: 298  AGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDFD 357

Query: 1191 DSTCRSLSKAFAERGLQDKAAAL-SMLLTEECETMDEAQ 1304
             S    L  AFAE  L ++A     +L+ + C   DE++
Sbjct: 358  ISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDESR 396


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  472 bits (1215), Expect = e-130
 Identities = 235/349 (67%), Positives = 286/349 (81%), Gaps = 2/349 (0%)
 Frame = +3

Query: 237  QESVDDLKSRIFTVRLPKRSVTNVLQNWVNEGHQITISDLRKITRELRQSQRFKHALELS 416
            +E+ DDLK RIF +RLPKRSVTNV+  WV EG+ ++ S+LR I++ELR+SQRFKHALE+S
Sbjct: 4    KENEDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEIS 63

Query: 417  EWMIAHDEREMLDSDYAVRIDLMTKVFGVDAAERYFESLPPSAKTSETYTSLLHCYAVLK 596
            EWM+AH+E E+ D+D+A RIDLMTKVFGVDAAERYF+ LP +AKT+ETYT+LLH YA  K
Sbjct: 64   EWMVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAK 123

Query: 597  LTEKAEQLYRRIKESNLSLTALTYNELMTLYISVGQVEKVSTVVEDLKCQNIAPDLFTYN 776
            L EKAE+ Y+RIK SNL  TAL YNE+MTLY+SVGQ+EKVS VVE+LK Q +APD+FTYN
Sbjct: 124  LIEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYN 183

Query: 777  LWVSAHAAALKIDEVRRILDEMSHDPSFNDDWARYVKLAKIYLSSGNLVNSE--TNSVVE 950
            LW+S+ AAAL ID+VRRILDEMS D   NDDW RY+K+  IY+++G+LVN+E  T +VVE
Sbjct: 184  LWISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVE 243

Query: 951  SEKGITQRELITYDFLIILYGGLGNKDKLDQIWKSLRMTKQKMTSRNYLCILSSYLMLGN 1130
            +EK ITQRE ITYDFL+ILY GLG KDK+DQIWKSLRMT QKMTSRN++CILSSYLMLG+
Sbjct: 244  AEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGH 303

Query: 1131 LKEVEEVIDQWKLSATTEFHDSTCRSLSKAFAERGLQDKAAALSMLLTE 1277
            LKEV E++DQWK S TT+F  S C  L  A +  GL + A    MLL E
Sbjct: 304  LKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIE 352


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 399

 Score =  471 bits (1211), Expect = e-130
 Identities = 246/397 (61%), Positives = 303/397 (76%), Gaps = 7/397 (1%)
 Frame = +3

Query: 111  MAARSIFTALTR-------NLRKERNILRPFSSEATKAQIVYEQEPSADQESVDDLKSRI 269
            MA RS+F +L R        L    N  R  SS A  + +V E       E  DDL+SRI
Sbjct: 1    MAHRSLFLSLRRFSSCRNSGLACVLNRTRFVSSGAVSSDLVEESV-----EGDDDLRSRI 55

Query: 270  FTVRLPKRSVTNVLQNWVNEGHQITISDLRKITRELRQSQRFKHALELSEWMIAHDEREM 449
            F +RLPKRS TNVLQ WV +G+ IT+S LR I++ELR+SQR+KHALE+SEWM++++E E+
Sbjct: 56   FRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYEL 115

Query: 450  LDSDYAVRIDLMTKVFGVDAAERYFESLPPSAKTSETYTSLLHCYAVLKLTEKAEQLYRR 629
             DSDYAVRIDLMT+VFG+DAAERYFE LP + KT+ETYT+LLH YA  KLTEKAE+LY+R
Sbjct: 116  SDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQR 175

Query: 630  IKESNLSLTALTYNELMTLYISVGQVEKVSTVVEDLKCQNIAPDLFTYNLWVSAHAAALK 809
            IK+SNLS  ALTYNE+MTLY+SVGQ EKV  VVE+LK Q ++PD+FTYNLW+S+ AA L 
Sbjct: 176  IKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILN 235

Query: 810  IDEVRRILDEMSHDPSFNDDWARYVKLAKIYLSSGNLVNSETNSVVESEKGITQRELITY 989
            IDEVRRILDEMSH    N+ W RY+ LA IY+S  +L N+ +N++VE+EK ITQR+ ITY
Sbjct: 236  IDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWITY 295

Query: 990  DFLIILYGGLGNKDKLDQIWKSLRMTKQKMTSRNYLCILSSYLMLGNLKEVEEVIDQWKL 1169
            DFLIILYGGLG+KDKLDQIW SL MTKQKM SRNY+CI+SSYLMLG  KEV EVIDQWK 
Sbjct: 296  DFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQWKQ 355

Query: 1170 SATTEFHDSTCRSLSKAFAERGLQDKAAALSMLLTEE 1280
            S TT+F    C+ +  AF + GL + A  L+++L E+
Sbjct: 356  STTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEK 392