BLASTX nr result

ID: Cnidium21_contig00017272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017272
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...    97   1e-18
ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus ...    96   4e-18
ref|XP_004141700.1| PREDICTED: mitochondrial ubiquitin ligase ac...    95   7e-18
ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase ac...    91   1e-16
ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase ac...    89   4e-16

>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|297743001|emb|CBI35868.3| unnamed
           protein product [Vitis vinifera]
          Length = 391

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +3

Query: 3   NWNKWKEWRQMRRIQRDNTADSSEADTQIVTDEETAYIPEEEVCAICLTRRRRSAFIPCG 182
           NWN+WKEWRQ R ++  + A + + DTQI  D+    +P+ E+C ICL RR+RSAF+PCG
Sbjct: 297 NWNRWKEWRQQRGVRPPSQAVTDDTDTQIAEDD-AGDVPDGELCVICLMRRKRSAFVPCG 355

Query: 183 HLVCCPQCALSL 218
           HLVCC +CALS+
Sbjct: 356 HLVCCQRCALSV 367


>ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223539404|gb|EEF40994.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 387

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = +3

Query: 3   NWNKWKEWRQMRRIQRDNTADSSEADTQIVTDEETAYIPEEEVCAICLTRRRRSAFIPCG 182
           NWN+WK WRQ R+ Q+ + + S    +QI  +EET  +P+ ++C ICL RRRR+AFIPCG
Sbjct: 292 NWNRWKAWRQQRQFQQQSNSVSDADVSQIDVEEETVDVPDGQLCVICLMRRRRAAFIPCG 351

Query: 183 HLVCCPQCALSL 218
           HLVCC  CA+S+
Sbjct: 352 HLVCCQICAISV 363


>ref|XP_004141700.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Cucumis sativus] gi|449480528|ref|XP_004155921.1|
           PREDICTED: mitochondrial ubiquitin ligase activator of
           nfkb 1-like [Cucumis sativus]
          Length = 389

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 37/74 (50%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   NWNKWKEWRQMRRIQ--RDNTADSSEADTQIVTDEETAYIPEEEVCAICLTRRRRSAFIP 176
           NWN+WK+WRQ R++Q  R+++    E  + +  DE ++++P+ ++C ICL RR+RSAFIP
Sbjct: 292 NWNRWKQWRQHRQLQNSRNDSVPDDELSSHVPDDELSSHVPDGQLCVICLMRRKRSAFIP 351

Query: 177 CGHLVCCPQCALSL 218
           CGHLVCC +CA+S+
Sbjct: 352 CGHLVCCERCAVSV 365


>ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Glycine max]
          Length = 388

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/72 (52%), Positives = 51/72 (70%)
 Frame = +3

Query: 3   NWNKWKEWRQMRRIQRDNTADSSEADTQIVTDEETAYIPEEEVCAICLTRRRRSAFIPCG 182
           NWNKWK+W+Q R++Q+   A S   D +   D+E   +P+ ++C ICL RRRRS FIPCG
Sbjct: 296 NWNKWKQWKQQRQLQQQRQAVS---DVEPQMDDEIEDVPDGQLCVICLMRRRRSVFIPCG 352

Query: 183 HLVCCPQCALSL 218
           HLVCC  CA+S+
Sbjct: 353 HLVCCQGCAISV 364


>ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Glycine max]
          Length = 387

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/72 (52%), Positives = 50/72 (69%)
 Frame = +3

Query: 3   NWNKWKEWRQMRRIQRDNTADSSEADTQIVTDEETAYIPEEEVCAICLTRRRRSAFIPCG 182
           NWNKWK+W+Q R++Q+   A S   D +   D+E    P+ ++C ICL RRRRS FIPCG
Sbjct: 295 NWNKWKQWKQQRQLQQQRQAVS---DVEPQMDDEIEDAPDGQLCVICLMRRRRSVFIPCG 351

Query: 183 HLVCCPQCALSL 218
           HLVCC  CA+S+
Sbjct: 352 HLVCCQGCAISV 363


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