BLASTX nr result
ID: Cnidium21_contig00017270
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00017270 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncat... 101 5e-20 ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|2... 99 3e-19 ref|XP_003552689.1| PREDICTED: carnitinyl-CoA dehydratase-like [... 97 2e-18 ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [... 95 5e-18 emb|CAN82361.1| hypothetical protein VITISV_029254 [Vitis vinifera] 95 5e-18 >ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncatula] gi|355496875|gb|AES78078.1| Carnitinyl-CoA dehydratase [Medicago truncatula] gi|388518089|gb|AFK47106.1| unknown [Medicago truncatula] Length = 233 Score = 101 bits (252), Expect = 5e-20 Identities = 49/90 (54%), Positives = 67/90 (74%) Frame = +1 Query: 7 MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186 MCSLEK+G+I+IL LTGND+HRLNP+L++SI +ALHR+R +AT T + LITT G F Sbjct: 1 MCSLEKKGNIFILTLTGNDEHRLNPTLLNSIKSALHRVRQQAT----TSSVLITTAHGKF 56 Query: 187 FSNGGDIPWAQSNKQKFFFMMSKVRYLLTD 276 FSNG DI WAQ NK + + +R ++++ Sbjct: 57 FSNGYDIDWAQDNKSRIILIDDLLRSVVSE 86 >ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|222865338|gb|EEF02469.1| predicted protein [Populus trichocarpa] Length = 235 Score = 99.4 bits (246), Expect = 3e-19 Identities = 50/90 (55%), Positives = 69/90 (76%) Frame = +1 Query: 7 MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186 MC+LEKRG IYIL LTG+D+HRLNP+L+DSI +AL R+R E A+PS +AL+T EG F Sbjct: 1 MCTLEKRGDIYILTLTGSDEHRLNPTLIDSIRSALRRVRAE-PASPS--SALVTIAEGRF 57 Query: 187 FSNGGDIPWAQSNKQKFFFMMSKVRYLLTD 276 FSNG D+ WAQS++ + M +K++ L+ + Sbjct: 58 FSNGFDLAWAQSSQPRRELMSAKLQLLVKE 87 >ref|XP_003552689.1| PREDICTED: carnitinyl-CoA dehydratase-like [Glycine max] Length = 238 Score = 96.7 bits (239), Expect = 2e-18 Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 3/93 (3%) Frame = +1 Query: 7 MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186 MC+LEKRGSI+IL LTG+ +HRLNP+L+DSI ++L R+R EATA+ +AL+TT G F Sbjct: 1 MCTLEKRGSIFILTLTGDGEHRLNPTLLDSIQSSLRRVRQEATAS----SALVTTAHGKF 56 Query: 187 FSNGGDIPWAQSN---KQKFFFMMSKVRYLLTD 276 FSNG DI WA+S+ K++ M S +R +++D Sbjct: 57 FSNGYDIAWARSSDEVKERMILMDSLLRSVVSD 89 >ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera] Length = 241 Score = 95.1 bits (235), Expect = 5e-18 Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 4/94 (4%) Frame = +1 Query: 7 MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186 MCSLEKRG+I+IL LTG +HRLNP+L+D+ISAAL R+R E+ S +ALITT EG F Sbjct: 1 MCSLEKRGNIFILTLTGPGEHRLNPTLLDAISAALSRVRAES----SMSSALITTAEGKF 56 Query: 187 FSNGGDIPWAQSNKQKFF----FMMSKVRYLLTD 276 FSNG D+ WA ++ F M SK+R L+ D Sbjct: 57 FSNGYDLAWASASGGVFLDRVKLMSSKLRSLVAD 90 >emb|CAN82361.1| hypothetical protein VITISV_029254 [Vitis vinifera] Length = 241 Score = 95.1 bits (235), Expect = 5e-18 Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 4/94 (4%) Frame = +1 Query: 7 MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186 MCSLEKRG+I+IL LTG +HRLNP+L+D+ISAAL R+R E+ S +ALITT EG F Sbjct: 1 MCSLEKRGNIFILTLTGPGEHRLNPTLLDAISAALSRVRAES----SMSSALITTAEGKF 56 Query: 187 FSNGGDIPWAQSNKQKFF----FMMSKVRYLLTD 276 FSNG D+ WA ++ F M SK+R L+ D Sbjct: 57 FSNGYDLAWASASGGVFLDRVKLMSSKLRSLVAD 90