BLASTX nr result

ID: Cnidium21_contig00017270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017270
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncat...   101   5e-20
ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_003552689.1| PREDICTED: carnitinyl-CoA dehydratase-like [...    97   2e-18
ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [...    95   5e-18
emb|CAN82361.1| hypothetical protein VITISV_029254 [Vitis vinifera]    95   5e-18

>ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncatula]
           gi|355496875|gb|AES78078.1| Carnitinyl-CoA dehydratase
           [Medicago truncatula] gi|388518089|gb|AFK47106.1|
           unknown [Medicago truncatula]
          Length = 233

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/90 (54%), Positives = 67/90 (74%)
 Frame = +1

Query: 7   MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186
           MCSLEK+G+I+IL LTGND+HRLNP+L++SI +ALHR+R +AT    T + LITT  G F
Sbjct: 1   MCSLEKKGNIFILTLTGNDEHRLNPTLLNSIKSALHRVRQQAT----TSSVLITTAHGKF 56

Query: 187 FSNGGDIPWAQSNKQKFFFMMSKVRYLLTD 276
           FSNG DI WAQ NK +   +   +R ++++
Sbjct: 57  FSNGYDIDWAQDNKSRIILIDDLLRSVVSE 86


>ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|222865338|gb|EEF02469.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/90 (55%), Positives = 69/90 (76%)
 Frame = +1

Query: 7   MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186
           MC+LEKRG IYIL LTG+D+HRLNP+L+DSI +AL R+R E  A+PS  +AL+T  EG F
Sbjct: 1   MCTLEKRGDIYILTLTGSDEHRLNPTLIDSIRSALRRVRAE-PASPS--SALVTIAEGRF 57

Query: 187 FSNGGDIPWAQSNKQKFFFMMSKVRYLLTD 276
           FSNG D+ WAQS++ +   M +K++ L+ +
Sbjct: 58  FSNGFDLAWAQSSQPRRELMSAKLQLLVKE 87


>ref|XP_003552689.1| PREDICTED: carnitinyl-CoA dehydratase-like [Glycine max]
          Length = 238

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
 Frame = +1

Query: 7   MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186
           MC+LEKRGSI+IL LTG+ +HRLNP+L+DSI ++L R+R EATA+    +AL+TT  G F
Sbjct: 1   MCTLEKRGSIFILTLTGDGEHRLNPTLLDSIQSSLRRVRQEATAS----SALVTTAHGKF 56

Query: 187 FSNGGDIPWAQSN---KQKFFFMMSKVRYLLTD 276
           FSNG DI WA+S+   K++   M S +R +++D
Sbjct: 57  FSNGYDIAWARSSDEVKERMILMDSLLRSVVSD 89


>ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 241

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
 Frame = +1

Query: 7   MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186
           MCSLEKRG+I+IL LTG  +HRLNP+L+D+ISAAL R+R E+    S  +ALITT EG F
Sbjct: 1   MCSLEKRGNIFILTLTGPGEHRLNPTLLDAISAALSRVRAES----SMSSALITTAEGKF 56

Query: 187 FSNGGDIPWAQSNKQKFF----FMMSKVRYLLTD 276
           FSNG D+ WA ++   F      M SK+R L+ D
Sbjct: 57  FSNGYDLAWASASGGVFLDRVKLMSSKLRSLVAD 90


>emb|CAN82361.1| hypothetical protein VITISV_029254 [Vitis vinifera]
          Length = 241

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
 Frame = +1

Query: 7   MCSLEKRGSIYILKLTGNDDHRLNPSLVDSISAALHRIRCEATATPSTCAALITTGEGMF 186
           MCSLEKRG+I+IL LTG  +HRLNP+L+D+ISAAL R+R E+    S  +ALITT EG F
Sbjct: 1   MCSLEKRGNIFILTLTGPGEHRLNPTLLDAISAALSRVRAES----SMSSALITTAEGKF 56

Query: 187 FSNGGDIPWAQSNKQKFF----FMMSKVRYLLTD 276
           FSNG D+ WA ++   F      M SK+R L+ D
Sbjct: 57  FSNGYDLAWASASGGVFLDRVKLMSSKLRSLVAD 90


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